Clupea harengus (Atlantic herring): 105890593
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Entry
105890593 CDS
T09045
Symbol
pnpla3
Name
(RefSeq) patatin-like phospholipase domain containing 3
KO
K13534
patatin-like phospholipase domain-containing protein 3 [EC:
3.1.1.3
2.3.1.-]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00561
Glycerolipid metabolism
char01100
Metabolic pathways
Module
char_M00098
Acylglycerol degradation
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00561 Glycerolipid metabolism
105890593 (pnpla3)
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.3 triacylglycerol lipase
105890593 (pnpla3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patatin
Motif
Other DBs
NCBI-GeneID:
105890593
NCBI-ProteinID:
XP_031438638
Ensembl:
ENSCHAG00000005170
UniProt:
A0A6P8GHV5
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All DBs
Position
16
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AA seq
460 aa
AA seq
DB search
MMFAGKDHWNLSFAGCGFLGVYHIGVASCLLEQAPEFVHGAANIYGSSAGALTAAVLASR
ASIAKCCEEVIGLAREARSRNLGPLHPSFNLVKVMRSGLQRNLPADAHTLASGRLSVSLT
RVSDGKNVLVSQFSSKEELIQALICSCFIPVYCGLFPPSFRGVRYVDGGISDNLPQAGQK
NTVSISPFSGESDICPRGNSSSFHEFRLTNTSIQMSLGNMHRLSRALFPPEPKVLAEMCQ
NGYKDAMRFLQDNNLLRRDWPSTGPALADDLTTRCCSCSGQKSTVGMETTKEWVLRRLRL
LGRKQWCLDEERVGHLPAHIKKVFCAACREKKGLYGQVSDLLPLRMASVMLMPYTLPIQS
AYSAAQRFVEWIPEFPADVSWLVDVAGAAYRQAWRGTEAGRDTSAPQPPPLMEQDGHLSI
STVDLHGYSWNFADSPSPPRSPCTPSPTPRQICCFVGSHD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcgcgggtaaagaccactggaacttgtctttcgccggctgtgggtttttgggg
gtctatcacattggggtggccagctgtctcttggaacaagcccctgagttcgtccatgga
gccgcgaacatctacggatcctcggcaggagcgctgacagccgccgtgctcgcgagccga
gcctctatagctaagtgttgtgaggaggtgatcggtttggctcgggaggccaggagccgt
aacctcgggccgctccacccctccttcaacctggtgaaggtgatgcgctcggggctgcag
cggaacctcccggccgacgctcacaccctggcctccgggcgcctgagtgtgtcgctcacg
cgcgtgtctgatggcaagaacgtcctggtgtcccagttcagctccaaagaggagctcatc
caggctctcatttgtagctgttttatccccgtctactgcggactgtttccccccagcttc
cgtggtgtgcgatacgtggatgggggcatcagtgataacttgccccaggcggggcagaag
aacaccgtcagcatctctccgttctcgggcgagagcgacatctgccccaggggcaactcc
agcagcttccacgagttccgcctcaccaacaccagcatccagatgagcctgggcaacatg
caccgcctgagcagggcgctcttccccccagaacccaaggtcttggcagagatgtgtcag
aatggttataaggacgccatgcgcttcctgcaggataataatctgctgagacgggattgg
ccatctactggccccgccctcgctgatgacctcactacccggtgctgctcttgctctggt
cagaagagcactgttggcatggaaacaaccaaagagtgggtgctgcgcaggctccgcctc
ctggggaggaagcagtggtgtttggatgaagagagggtcggccacctgcccgcgcacatc
aagaaagtgttctgcgcagcatgtagggagaagaagggcttgtatgggcaggtttcggac
ctcctgcctctgcggatggcctctgtcatgctgatgccgtacacactccccattcagtct
gcatactcagcagcccagaggtttgtggagtggattcctgagttccccgcggatgtgtcc
tggcttgttgatgtagctggggctgcataccgacaggcctggagaggaacagaagcaggg
agagatacctcagcccctcagccccctcccctcatggagcaagatgggcatctgtcaatc
tcgaccgtggatctccatggatacagctggaacttcgcagacagcccctccccccccagg
agcccctgcactccaagcccaaccccccgacaaatctgttgttttgtgggttcacatgac
tag
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