Clupea harengus (Atlantic herring): 105890612
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Entry
105890612 CDS
T09045
Symbol
bbs4
Name
(RefSeq) Bardet-Biedl syndrome 4 protein
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105890612 (bbs4)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
char03037
]
105890612 (bbs4)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
105890612 (bbs4)
Cilium and associated proteins [BR:
char03037
]
Primary cilia and associated proteins
BBSome
105890612 (bbs4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_19
TPR_16
TPR_11
TPR_14
TPR_17
TPR_12
ANAPC3
TPR_CcmH_CycH
TPR_9
TPR_Slam
TPR_7
NatA_aux_su
ARM_TT21_2nd
ARM_TT21_N
TPR_15
Wzy_C_2
PknG_TPR
ARM_TT21_C
ARM_TT21_4th
TPR_20
TPR-S
TPR_10
HAT_PRP39_C
HrpB1_HrpK
Motif
Other DBs
NCBI-GeneID:
105890612
NCBI-ProteinID:
XP_031419688
Ensembl:
ENSCHAG00000023279
UniProt:
A0A6P8ETX3
LinkDB
All DBs
Position
3:463144..481055
Genome browser
AA seq
552 aa
AA seq
DB search
MIRAVGGSNAQSKRSLTERRSKDELSPLLINMADHDLKLEGQHIHSEKRLRSKKAPELPI
LEKRNWLIHLHYIRKDYETCKAIIREQLRETQGMCEYAIYVQALILRLEGKIQQSLELFQ
SCAILNPTSSDNLKQVARSLFLFGKHKAAIEVYNEAARLNQKDWEINHNLGVCYMYTKDF
RNAEDQLNRALLLNKHDLTYMMLGKICLLEGDTAKAIDVYKLAIESSPENTDFLATLGLL
YMQKGKYQKAFEYLGNALTYDPNHYKAILAAGSMMQTHGDFDVAMNKYRIAAYSVPESPP
LWNNIGMCFFGKKKYVAAISCLKRANYLSPFDWKILYNLGLLHLTMQQHASAFHFLSAAI
NLHPKMGELYMLLAVALTNLDDVENARRSYEQAALLDGSNPLVNLNFAVLLYNQGEKKEA
LQQYQEMEEKVNSLMENKSSIEFDTELIDTAQKLGSALQSGENVLWTRPTRDGKASQHLT
SNRTSATQQRLGTNQALGQAMSSAAGYSKSIQLTTGASSIALEPDVEPGMNSSPSESPGA
DDTSDTDEPKTT
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgatacgtgcagtaggtggcagcaacgctcagagtaagcgttcattaacagaaagaagg
agtaaagacgagctaagtccattgctaataaatatggctgatcatgatctgaaactggag
ggtcagcatatacactctgagaagagactacgatccaagaaagcaccagagctaccaata
ctggaaaagaggaactggttaatccatttacactacattcgcaaagactacgagacctgc
aaagccatcatcagagagcaactgcgagagacccagggcatgtgtgaatatgcaatttat
gttcaagccctgatcttacgtctggaggggaagattcaacagtctctggaactcttccag
agctgcgccatcctcaaccccaccagttctgataacctcaaacaagtggccagatcgctg
tttctcttcggaaagcataaagcggccatagaggtttacaatgaagctgctcggctcaat
cagaaagactgggaaataaaccacaatctgggtgtgtgctacatgtacactaaagacttc
agaaatgcagaagatcaactgaatagagccctgctattaaacaaacatgacttgacttat
atgatgcttgggaaaatctgcctgcttgagggagataccgcgaaagccatcgacgtgtac
aagttagctattgagtcatctcctgagaacacagatttcttggccacacttggactgctc
tacatgcagaaagggaaatatcaaaaagcttttgaatacctcggaaatgccctgacttat
gatcccaaccattacaaggccatcctcgcagcgggcagcatgatgcagacacacggggac
ttcgacgtcgccatgaataagtaccgcatcgccgcctactccgtgcccgagagccccccg
ctgtggaacaacattggcatgtgcttctttgggaagaagaaatatgtagctgccatcagt
tgtctcaagagggccaactatctgtctccgttcgactggaagatcttgtacaacttaggg
ctgctgcacctgactatgcagcagcacgcctctgcgtttcacttcctcagcgcggccatc
aacctccaccccaagatgggggaactctacatgctgctggcagttgcattgaccaacctg
gatgacgtggagaacgcacgccggtcctacgagcaggcggcccttttggatgggtccaac
cctttagtaaacttgaactttgcagttctcttgtacaatcaaggagagaagaaggaggct
cttcagcagtatcaggagatggaggagaaggtcaattcgcttatggaaaacaagagcagc
atagaatttgatacagagttgatcgacacggctcagaagctaggatcggccctccagtcc
ggagagaacgtcttatggaccagacccaccagagatggaaaagccagccaacacctgacc
tccaaccggaccagcgccacccagcagcgcctgggcaccaatcaagccttggggcaggct
atgtcctcagcagcaggatatagcaagagtatccaacttactacaggtgcatcatccatt
gctttggaacccgatgtagaacccggcatgaacagctcaccatcagagtcccctggggcg
gacgacacctctgacaccgatgaacctaaaactacatag
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