KEGG   Clupea harengus (Atlantic herring): 105890614
Entry
105890614         CDS       T09045                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like isoform X1
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03250  Viral life cycle - HIV-1
char04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    105890614
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    105890614
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:char03400]
    105890614
DNA repair and recombination proteins [BR:char03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     105890614
SSDB
Motif
Pfam: SAM_2 HD SAM_1 HD_assoc_2 NOA36 PDEase_I Cwf_Cwc_15 Autophagy_act_C PBP1_TM
Other DBs
NCBI-GeneID: 105890614
NCBI-ProteinID: XP_031421792
Ensembl: ENSCHAG00000002379
UniProt: A0A6P8FEZ2
LinkDB
Position
4:complement(6837556..6849659)
AA seq 650 aa
MDSRKRLRVDLPCNPTNNFKTPEKRVSEVPRRDGSFKQQGVDFRHWDVETTCSYLRHEGL
EEWESKFKEQEITGVGLRYLTESHLKEIGIGPLGKRLQIIHSLQKLWHITDVPMKVFNDP
IHGHIEIHPLLMRIIDTPQFQRLRHIKQLGGAYLVFPGASHNRFEHSLGVGYLAGKLVQA
LNERQPELLITRQDILCVQIAGLCHDLGHGPFSHMYDGMFIPKVRPEYKWKHEKASVQMF
DHLVRENELEAVMREHGLTLPDDLVFIKEQIAGPPEDPTAPRHGQAPWPYKGRPEEKSFL
YEIVANKRNGIDVDKWDYFARDCYHLGIQNNFDYHRFLRFARVCEVKGKKHICTREKEVG
NLYDMFHTRSCLHRRAYQHKVGNIIETMITEALVKAHPHIQIQGSGGKMFSLSTAIDDME
AYTKLTDHIFLQILYSSSAELAGAREILQNIICRRLYKCVGQTSPTTHVDVSQDKLLEWA
KEVASSKPSGEHVVLKGEDFVVNVISLDYGMKGKNPINSVHFYCKNDPTKAIKIRRNQVS
QLLPEKFAEQLIRVHCKRTDEHSLEAAKKYFVQWCMDNNFTKPQDGDVTAPELTPLKASW
ASDDRDDDDDDDDDEDDEDEESEGNSHPARAAQHSTPQSSSLKAKSRLFP
NT seq 1953 nt   +upstreamnt  +downstreamnt
atggatagtcgaaaacgtctaagagtggatttaccatgcaacccaaccaacaacttcaaa
accccagaaaagcgggtgtcagaggttccacgtcgggatgggagcttcaaacagcaaggt
gtagatttcagacactgggatgttgaaaccacttgtagttaccttcgtcatgagggactt
gaagaatgggagagcaaatttaaagagcaagagattacaggggtggggttgcgctacctc
acagagtcgcatctgaaggagatcggaattggacctctggggaaacgcttgcagattatc
cacagcctgcagaaactatggcacatcacagacgttcctatgaaggtcttcaacgacccc
atccacggccacattgagatacaccccctcctgatgcgcattatagacactcctcagttc
cagaggctccgccacatcaagcagctgggtggggcctacctggtgttcccaggggcatcc
cacaaccgctttgaacactctctcggggtcgggtatctggctggtaagctggtccaagcc
ctgaatgaacgacaacctgagctactcataaccaggcaggatatcctgtgtgtgcagatt
gcaggcctgtgccacgacttgggacatgggccgttctctcacatgtacgatggaatgttc
atccccaaagttcgcccagagtacaagtggaagcatgagaaggcctctgtgcagatgttt
gaccacctggtgagggagaatgaactggaggcggtgatgcgggagcatggcctgaccctc
cccgatgacctggtgttcattaaggagcagatcgccggacccccggaggacccaaccgcg
cctcgccacggacaggccccttggccctacaaaggcaggcctgaggaaaagtccttcctg
tatgagattgtggccaacaaaaggaatggcatcgatgtggacaagtgggactactttgcg
agggactgttaccaccttggcatccagaacaactttgattaccaccgcttcctgaggttt
gctcgcgtgtgtgaggtcaaggggaagaagcacatttgcaccagagaaaaggaggtaggg
aacctgtatgacatgttccacacgcggagctgccttcatcgcagagcgtaccagcacaag
gttggcaacatcattgaaaccatgattacagaggccctggtgaaggcacacccccacatt
cagatccagggctcaggagggaagatgttctctctctccacagccatagatgacatggag
gcctacactaaactcacagaccatatctttctgcagatcctctactcatcctctgcagag
ttggcgggagctcgggagatcctccagaacatcatctgccggcgtctgtataagtgtgtg
ggtcagaccagccccaccactcacgtggacgtgtcccaggataagctgctggagtgggct
aaagaagtagccagctccaaacccagtggtgaacatgtggtcttgaagggcgaggacttt
gttgtcaatgtcatctccttggactacggcatgaagggcaagaaccccatcaacagcgtc
cacttctactgcaaaaacgacccgacgaaggccatcaagatccgcaggaatcaggtgtcc
cagctgctgcctgagaagtttgcggagcagctgatccgcgtgcactgcaagcgcacggac
gagcacagtctggaggctgccaagaagtattttgtgcaatggtgcatggacaacaacttc
accaagcctcaggatggtgacgtgactgcacctgaactgacccctctgaaggcgagctgg
gccagcgatgaccgcgatgatgatgatgatgatgatgatgatgaagacgatgaagatgaa
gaatctgagggcaacagtcatccagccagggcagcacaacacagcacgccacagagcagc
agtctgaaggccaaaagcaggcttttcccatag

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