Clupea harengus (Atlantic herring): 105890626
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Entry
105890626 CDS
T09045
Symbol
flna
Name
(RefSeq) filamin-A isoform X1
KO
K04437
filamin-A
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04010
MAPK signaling pathway
char04510
Focal adhesion
char05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105890626 (flna)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105890626 (flna)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
105890626 (flna)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105890626 (flna)
04147 Exosome [BR:
char04147
]
105890626 (flna)
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
105890626 (flna)
Intermediate filaments
Intermediate filament-binding proteins
105890626 (flna)
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105890626 (flna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Y_Y_Y
Big_3_5
GBD_IRG7_N
CFSR
Invasin_D3
Motif
Other DBs
NCBI-GeneID:
105890626
NCBI-ProteinID:
XP_012672127
Ensembl:
ENSCHAG00000010701
UniProt:
A0A6P3VHL9
LinkDB
All DBs
Position
4:7033076..7074041
Genome browser
AA seq
2564 aa
AA seq
DB search
MSSQHPRLHQSSAAAAPVSNAAQEKDADMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKC
VNKRLANLQTDLGDGLRLIALLEVLSQKKMFRKYNQRPTFRQMQLENVSVGLEFLDRENI
KLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDEDEETSDDGRQKTPKQRLLGWIQ
NKLPELPITNFHSDWQTGRALGALVDSCAPGLCPDWDSWDQTKPVDNAREAMQQADDWLG
VPQLMTPEEIVDPKVDEHSVMTYLSQFPKSKLKPGAPLRPKLNPKKARAYGPGIEPSGNV
VMKKAVFTVETISAGMGEVLVYVEDPAGHREEAKVTANNDKNRTYCVFYIPKVTGMHKVT
VLFAGQHISKSPFEVDVGMAQGDSSKVTAQGPGLEPSGNIANKATYFDVYIAGAGVGEVE
VVIMDPSGKKDTVECQIEDKGNSSYRCTYKPILEGQHIVYVTFAGGQISKSPYTVNVGEA
CNPSLVRAKGRGLQPKGLRVKETAEFKVYTKGAGTGDLKVTIKGPKGLEEPCKKKDLGDG
VYGFDYYPTTPGNYSITITWGGQHIPRRSGSVSELHATSPFEVKVGTEAGPQMVRAWGPG
LESGVVGKSADFVVEAVGDDVGTLGFSVEGPSPAKIECDDKGDGSCDVRYWPTEPGEYAV
HVLCKSEDIQHSPFMAEIVTAPGKDFYPDKVKAHGPGLQASGLAMGKPAEFTVDAKHAGK
AALKVQAQDRDGNPVDVQVKDNGNGTYTCTYTPRKPMKHTVMISWGGVNIPESPFRMNIG
AGCHPNKVKVSGPGIGKTGLKAFEPTYFTVDCAEAGTGDISIGIKCAPGVVGPAEADIDF
DIIRNDNDTFTVKYTPPGAGSYTIMVLFADQAIPMTPIRIKVDPAHDASKVKAEGPGLSR
TGIELNKPTHFTVNTKGAGKAKLDAQFTGPTKGEAVRDFEVINNHDNTHTVKYTPVQQGA
LGVNVTYGGDSIPKSPFSVAVAPSLDLSKVKVAGLGEKMPVGKDQDITVKSKGAGGQGKV
AAKVTGPAGKAVPCKVEPGLSPETSQVRFIPRDKGPYEVELTYDGAPIPGSPFAVEAVSP
TDASKVRCSGPGLEKAKVGETGQFVVDCTNAGPAELTIEIISDNGTEAEVHIQDNGDGTY
TITYIPLYPGAYTLTIRYGGQDVPNFPAKLNVEPAVDSSGVKVFGPGVEGKGVFREATTD
FTVDARALTKSGGNHIKTCINNPSGNRTDALIRDLGDGTYQVEYTPYEEGMHNVEVAFDD
SPVPKSPFRVAVTEGCDPARVRVHGPGLKCGITNKNNQFTVETRGAGTGGLGLAVEGPSE
AKMSCVDNKDGSCSVEYVPYEPGTYNLNITYGGQPITGSPFSVPVHDKVDATKVKCQGQG
IGNNVRANIPQVFTVDASKAGVAPVQVRVQGPKGVVEPVEVADNGDQTHSVSYVPTREGP
YSINVLYGDEEVPRSPYKVKVLPTHDASKVRASGPGLNTTGVPASLPVEFTIDAKDAGEG
LLAVQITDPEGKPKKANIRDNQDGTYLVSYVPDMTGRYTILIKYGGDEIPYSPYRIRALP
TGDASKCTVTVSIGGHGLGAGVGPTIQIGEQTVITVDAKNAGKGKVTCTVCTPDGAEVDV
DVVENEDGTFDIFYTAPQPGKYVICVRFGGEHIPNSPFQVTALDGAPTEQLMQQTQVPQY
AYAPNMGQPWATDRPMGMNGLDVAGLRPFDLVIPFTIQKGEITGDVRMPSGKVAKPDITD
NKDGTVTVKYAPTEAGLHEMDIKYDGIHIPGSPLQFYVDYVNSGHVNAYGPGLIHGMVNK
PAVFTVDTKDAGEGGLSLAIEGPSKADISCTDNQDGTCTVSYLPVLPGDYNILVKYNDKH
IPGSPFVAKITGDDSMRMSHLKVGSAADIPLDIGELDLSQLTASLTTPSGREEPCLLKLL
RNGHVGISFVPKEIGEHLVNIKKNGRHIPNSPIAVMINQSEIGDATRVRVSGQGLSEART
FEPAEFIIDTRDAGYGGLSLSIEGPSKVDINTEDLEDGTCKVTYCPTEPGNYIINIKFAD
QHVPGSAFTVKVTGEGRMKESITRKRRAASVANVGSQCDLSLKIPEISIADMTAQVTSPS
GKIHKAEIMEGENNTYCIRFVPTEMGVHTVSVKYQGQHVPGSPFQFTVGPLGEGGAHKVR
AGGPGLERAEAGAPAEFSIWTREAGAGGLSIAVEGPSKAEIAFEDRKDGSSGVSYIVQEP
GDYEVSIRFNDEHIPDSPFVVPVASPSDDARRLTVASLQESGLKVNQPASFAVSLNGAKG
VIDAKVHSPSGALEECCVTEIDEDKYAVRFIPRENGLYLIDVKFNGSHIPGSPFKIRVGE
MGQAGDPGMVSAYGAGLEGGTTGSPCEFIVNTSSAGAGALAVTIDGPSKVKMDCQECPEG
YKVTYTPMAPGNYLISIKYGGPYHIVGSPYKAKITGSRLVSSHSMHETSSVMVDPVTRSV
TSSQQAAPGWASSDASRVVAKGLGLTKAFVGQKNSFSVDCSKAGRNMLLVGVDGPKVPCE
EILVKHLGNRLYNVSYQLKEKGEYILVVKWGDEHIPGSPYHFTV
NT seq
7695 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcaacacccacgcctccaccagtcgagcgccgccgctgctcccgtatccaac
gcagctcaagaaaaggacgccgacatgccagccacggagaaggatctagccgaggatgca
ccctggaagaagatccaacaaaacacctttacacgatggtgcaacgaacatcttaaatgt
gttaataagagactcgcgaacttgcagacggatctgggcgatgggctccggctgatagcg
ctccttgaggtgctcagccagaagaagatgttccgcaagtacaaccagcgcccaacgttc
aggcagatgcaactggagaacgtctcggtggggttagaattcctggacagggagaatatc
aaactcgtttccatagacagtaaagccatagtggatggtaacctcaagctgatcctgggg
ctgatatggactctcattctccactactccatctccatgcccatgtgggacgaggacgag
gagacgtcggacgacggcaggcagaagacgcccaagcagaggctgctgggctggatccag
aacaagctgcccgagctgcccatcaccaacttccacagcgactggcagacgggccgggcc
ctgggagctctggtggacagctgtgccccaggcttgtgtccagactgggactcctgggac
cagaccaagcctgtggacaacgccagggaagctatgcagcaggctgacgactggctgggt
gtgccccagttgatgaccccagaagaaattgtggaccccaaagtggacgagcactccgtc
atgacctacctgtcccagttccccaagtccaaactgaagcctggcgctcctctgcgcccc
aaactcaacccaaagaaggcccgcgcctatggaccaggtatcgagccctctggtaatgtg
gtgatgaagaaggctgtgttcactgtggagaccatcagcgctggaatgggagaggtgctg
gtctacgtggaggatcctgcaggacatcgcgaggaggctaaagtcactgccaacaatgac
aagaaccgtacctactgcgtattctatattccaaaagtcactggaatgcacaaggtgacg
gtgttgtttgcgggccagcacatctccaagagcccctttgaggtggacgtgggcatggct
cagggagactccagcaaggtcaccgcccagggcccaggcctggagccatctgggaacatc
gccaacaaggccacctactttgatgtctacatagcaggtgccggtgttggtgaggtggaa
gtggtcatcatggacccaagtggcaagaaggacactgtggagtgccagatcgaggacaag
ggcaacagcagctaccgctgcacctacaagcccatcctggaggggcagcacattgtctac
gtcacctttgcgggtggtcagatctccaagagcccatacacagtcaatgtgggagaggct
tgtaacccaagtctggtgagggcaaagggccgtggcctgcagcctaagggcctgagggtg
aaggagactgccgagtttaaggtgtacaccaagggagccggcactggagacctcaaagtc
accatcaaagggcccaagggtctcgaggagccctgtaagaagaaggacttgggcgatggg
gtctacggctttgactattaccccaccacccctggaaactacagcatcaccatcacatgg
ggaggccagcacatccctcgcaggtcagggtctgtctctgaacttcacgcgaccagcccc
tttgaggtgaaggtgggcaccgaggccgggccacagatggtacgtgcctggggtcctgga
ctggagagcggcgtcgtgggcaaatctgcagactttgtggtggaggcagtcggagatgat
gttggcacacttggcttctctgtggagggaccatctcctgccaagatcgagtgcgacgat
aaaggcgatgggtcgtgcgacgtgcggtactggcccacagaacccggcgagtacgcggtg
cacgttctctgcaagagcgaggacattcagcacagccccttcatggctgagatcgtaaca
gcgccaggaaaagacttctaccccgacaaggtcaaagcccacggtcccggtcttcaagcc
agcgggttggccatgggcaagccagcagagtttactgtggatgccaaacatgctggcaaa
gctgcactgaaggtccaggcccaggatcgggatggaaacccagtggatgttcaggtcaag
gacaacggcaacggcacctacacctgcacctacacgccccgcaagccgatgaaacacaca
gtcatgatctcctggggtggcgtcaacattcccgagagcccattcaggatgaacattgga
gctggatgccaccccaacaaggtcaaagtgtcaggccctggcattgggaagactggtctg
aaagctttcgagccgacctacttcactgtggactgcgctgaggccggcacaggtgatatc
agcattggaatcaagtgtgccccaggtgtggttggaccagcagaggccgatattgacttt
gacatcatccgaaatgacaatgacacattcactgttaaatatacaccccctggcgcggga
agctacaccatcatggtgctgtttgctgatcaggccattccaatgacccccatcagaata
aaggtggatcctgcccatgacgccagcaaggtcaaggccgagggaccagggctgagccgt
actggtattgagctgaacaagcccacgcacttcaccgtaaacaccaagggagcgggcaaa
gccaagctggacgcccagttcaccggccccaccaagggagaggcagtgcgcgactttgag
gtcatcaacaaccatgacaacacccacacggtcaaatacacccccgtacaacagggcgcc
ctgggggtgaatgtcacctacgggggggactccattcccaagagccccttctctgttgct
gttgctccctccctggacctcagcaaggtcaaggtggctggcctgggagaaaagatgcct
gtcgggaaagaccaagatatcaccgtcaagtcaaagggtgccggcggccagggtaaggtg
gcggccaaggtgaccggtcccgccggtaaggccgtgccatgcaaggtggagccaggtctt
agccctgagaccagccaggtgcgcttcatccccagagacaagggcccctacgaggtggag
ctcacctacgacggagcccccatccctggtagccccttcgcggtggaggccgtgtcaccc
acagatgcatcgaaggtccgttgctctggtcccggtttggagaaagccaaggttggcgag
accggccagttcgtggtggactgcaccaacgctggcccagctgaactgaccatcgagatc
atctctgacaacggtaccgaggctgaggtgcacatccaggacaatggagacggcacctac
accatcacctacattcccctttaccccggagcctacaccctcaccatccgctacggtggc
caggatgtgccaaacttccctgccaagctcaatgtggagccagctgtggattccagtggg
gtgaaggtgttcggacctggtgttgaaggcaaaggtgtgttccgtgaggccactacagac
ttcactgtggatgcccgagctcttaccaagagtggtggcaatcacatcaagacctgcatc
aacaacccctctggcaaccgcactgatgccctgatccgtgacctcggggatggcacctac
caagtggagtacactccctatgaagaaggtatgcacaatgtggaggttgcctttgacgat
tccccagtgcccaagagcccgttccgtgtggccgtgacggagggttgcgaccctgcccgc
gtgcgtgttcatggacccgggctgaagtgtggcatcaccaacaaaaataaccagttcact
gtggagacccgtggggcaggcacaggaggtttgggcctggcagtggagggaccctccgag
gcaaagatgtcctgcgttgataacaaagatggcagctgctcggtcgagtatgtcccttac
gagccaggcacctacaacctgaacatcacgtatggaggccagccaatcacaggaagtcct
ttctctgtacctgtccatgacaaagttgatgccactaaggtcaaatgccaaggtcaggga
attggaaacaatgtgcgggccaacatcccacaagtcttcactgtggatgccagcaaggct
ggtgtggctcctgtccaggtccgagtacagggccccaaaggagtggttgagccagtggag
gtggctgataacggcgatcagactcattccgtgagctacgtgccaaccagagagggcccc
tactccatcaatgtgctctacggggatgaggaggttccacgcagtccctacaaggtgaag
gttctgcccacccatgatgccagtaaagtgcgtgccagtggtcctggtctcaacaccacc
ggtgtgcctgccagtctgcccgtggaattcaccattgatgccaaggatgcaggcgagggc
ctgctggctgttcagatcactgacccagaagggaaacccaagaaagccaacatccgggac
aaccaggatggaacctacctggtgtcctacgtgccggacatgaccggccgatacaccatc
ctcattaagtacggcggagacgagatcccctactccccgtatcgcatccgagccctgccc
acaggagacgccagcaaatgcactgtcaccgtctcaatcggaggtcacggtttgggtgct
ggtgtcgggcccaccatccagatcggagagcagaccgtcataacagtggacgcaaagaat
gccgggaagggcaaggtcacctgcacggtgtgcacccccgatggagccgaggtggatgtt
gatgttgtggagaatgaggatggaacctttgacattttctacaccgcaccacagcccggg
aagtacgttatctgcgtgcgcttcggaggagagcacatccccaacagtcccttccaggtc
acggcgttggacggtgcccccaccgagcagctcatgcagcagacccaggtcccgcagtac
gcctacgcgcccaacatgggccaaccctgggcgacggacaggcccatgggcatgaacggg
ctggatgtggctgggctgcgacctttcgacttggtcattccattcaccatccagaaggga
gagattacaggcgacgtgcgaatgccatctgggaaagtggccaagcctgacatcacggat
aacaaggacggcactgtcacagtgaagtatgcccctacagaggcaggcctgcacgagatg
gacatcaaatacgacggcatccacatcccaggaagtccactgcaattctatgtggactat
gtcaacagtggccatgtgaatgcctatggcccagggcttatccatggcatggtcaacaag
cctgcggtcttcactgttgacaccaaggacgctggagaaggtggtctgtctctggccatt
gaggggccctccaaggccgacatcagctgcactgacaaccaagatggcacctgcacagtc
tcatacctgccagtgttgcctggggactacaacattctggtcaaatacaatgacaagcac
atcccaggcagtccattcgtagccaagatcacaggtgatgactccatgcgcatgtctcac
ctgaaggtgggctcggccgcagacattcctctggacatcggggagttggatctgagccag
ctgaccgcctctctgaccactccctccggccgagaggagccgtgcctgctcaagttgctc
cgcaacggccacgtgggtatctccttcgtgcccaaggagatcggcgagcacctggtgaac
atcaagaagaatgggcgtcacattcccaacagccccatcgcagtcatgatcaaccaatca
gagatcggagacgccacccgcgtgcgtgtgtctggacagggcttgagcgaggctcgcacg
ttcgagccagctgagttcatcattgacactcgtgatgcaggttatggtggcctcagtctg
tccatcgagggtcctagtaaagtggacatcaacacagaggacctggaggacggaacctgc
aaagtcacctattgccccaccgagccaggaaattacatcatcaacattaaatttgctgac
cagcatgtcccaggaagtgctttcactgtgaaggtcaccggagagggcaggatgaaggag
agcatcaccaggaagagaagagccgcctctgtggctaatgtaggcagccaatgtgacctg
agtctgaaaatcccagagatcagcatagctgacatgaccgcccaggtcaccagtccttcc
ggaaagatccacaaggccgagatcatggagggagagaacaacacctactgcatccgcttc
gtccccacagagatgggcgtgcacacagtcagcgtgaagtaccagggccagcacgtccct
gggagccccttccagttcacagtggggccactgggagagggaggggcccacaaggtccgc
gccggaggccctggacttgagagggcagaggccggagctccagctgaattcagcatctgg
actcgtgaggctggtgctggaggtctgtctattgctgtcgagggccccagcaaagcagaa
atcgcctttgaggaccgcaaggacggatccagtggcgtctcctacattgtccaagaacca
ggagactatgaggtttccatccgcttcaacgacgagcacatccccgacagccccttcgtg
gtgccagtggcctcgccgtctgacgatgcccgccgtcttactgttgccagtcttcaggag
tcgggattaaaggtgaaccaaccggcttcgtttgcggtaagcctgaacggggcgaagggc
gtcatcgacgccaaggtgcacagcccgtctggagctctggaggagtgttgcgtcacagag
atcgatgaagacaagtatgctgtgcggttcattccgagggaaaatggtctgtacctcatt
gatgtgaagttcaatggctcccacattcctggaagccccttcaagatccgggttggggaa
atgggccaggcaggagacccaggaatggtgtctgcatatggggccggactagagggaggc
accacaggatctccgtgtgagtttatcgtgaacacaagctcagctggtgccggtgctctg
gctgtgaccatcgacggcccctctaaggtgaagatggactgtcaagagtgcccagagggc
tacaaggtcacctataccccaatggctcctgggaactatttgatctcaatcaaatatggc
ggaccctatcacattgtcggcagcccatacaaagctaaaatcactgggtctcgcctggtc
agtagccacagcatgcatgagacctcatctgtgatggtggacccagttacccgtagcgtg
acatccagtcagcaggcggcgccaggctgggcctcgtctgatgccagtcgggtggttgcc
aagggcctgggtctcaccaaagcctttgttggccaaaagaacagcttcagcgtggactgc
agcaaagcagggaggaatatgctattggtaggagttgatgggcctaaagtaccatgcgag
gaaattctggtgaaacacctgggcaaccgcctctacaacgtctcctaccagctcaaggag
aagggcgagtacatcctggtggtcaaatggggcgatgaacacatcccgggaagcccctac
cacttcaccgtctaa
DBGET
integrated database retrieval system
