Clupea harengus (Atlantic herring): 105890653
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Entry
105890653 CDS
T09045
Symbol
uba1
Name
(RefSeq) ubiquitin-like modifier-activating enzyme 1 isoform X1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105890653 (uba1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105890653 (uba1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105890653 (uba1)
Enzymes [BR:
char01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
105890653 (uba1)
Ubiquitin system [BR:
char04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
105890653 (uba1)
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105890653 (uba1)
Exosomal proteins of other body fluids (saliva and urine)
105890653 (uba1)
Exosomal proteins of colorectal cancer cells
105890653 (uba1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_UFD
E1_FCCH
E1_4HB
BilD_C
Viral_DNA_Zn_bi
Motif
Other DBs
NCBI-GeneID:
105890653
NCBI-ProteinID:
XP_012672169
Ensembl:
ENSCHAG00000017679
UniProt:
A0A6P3VHV8
LinkDB
All DBs
Position
4:complement(7274299..7297726)
Genome browser
AA seq
1061 aa
AA seq
DB search
MSSSPLSKKRRLSGSETKTGSHCSSSNSVRTELPYTPSNGMAKNGSDAEIDEGLYSRQLY
VLGHEAMKRMQTSNVLISGLRGLGVEIAKNVILAGVKSVTLHDQGIAEWRDLSSQFYLRE
ADLGKNRADVSQTRLAELNSYVPVVSYTGTLTNDYLNQFQAVVLTNSSLEEQQRVGEYCH
SKNIKLIIADTRGLFGQLFCDFGEDMVVFDPNGEEPLSAMISMITKDSAGVVTCLDEARH
GFESGDSVTFTEVQGMTDLNGCQPIEIKALGPYTFSICDTTSFSDYVRGGIVTQVKIPKK
ISFKSLSSSLTEPEFILTDFAKFDRPGQLHVGFQALHAFEKKNSRPPKPWNKADAEELVA
LAGEVNSSQTGSAKQEQLDEALIKKLASVSAGDLAPVNAFIGGLAAQEVMKACTGKFMPI
MQWLYFDALECLPETEELMPTEEEAAPRNCRYDGQCAVFGTALQELLFKQRYFLVGAGAI
GCELLKNFAMMGLAGGEGEIIVTDMDTIEKSNLNRQFLFRPWDVTKMKSDTAAAAVKHMN
PSVRITGHQNRVGPETERVYDDDFFESLNGVANALDNVDARMYMDRRCVYYRKPLLESGT
LGTKGNVQVVIPFVTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQPA
ENAMQYLTDPKFMERTLKLPGAQPLEVLEAVYKSLVTDCPRNWEECVTWARHHWQCQYSN
NIRQLLHNFPPDQLTSSGAPFWSGPKRCPHPLEFDTSNELHMDYVMAGANLLAMSYGMPV
SRDRANVVRILQELKVPTFTPKSGVKIHVSDQELQNSNASVGNSDDCRLEELKTLLPAAE
SASKFKLCAIEFEKDDDTNFHMDFIVAASNSRAENYDIAPADRHKSKLIAGKIIPAIATT
TAAVVGLVCLELLKVVQKHKKLDSFKNGFMNLALPFFAYSEPIAAPKHKYYEIDWTLWDR
FEVKGMQPRGEEMTLREFLDYFKNEHKLEITMLSQGVSMLYSFFMPAAKLKERLDLPMTE
IVTKVSKKKLGKHVKALVFELCCNDETDEDVEVPYVRYTIR
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctcgccgctgtccaagaagcgtcgcttgtcaggatcagagacgaagacggga
tcccattgctcctcctcaaactctgtcagaactgaactgccctacacaccctctaacggc
atggctaagaatggcagtgatgctgagattgatgaaggcctgtactctcgacagctgtat
gtgctcggccatgaggccatgaagcgcatgcagacctccaacgtcctcatctcaggactg
cgtggcctcggcgtcgagatcgccaagaatgtcatcctggctggagtcaagagtgtcacc
ctgcacgaccagggcatcgccgagtggcgggacctttcctcacagttctatctgcgcgag
gcagacctggggaagaaccgcgctgacgtcagccagacccggctggccgagctcaacagc
tatgtgcctgtggtctcttacaccggaacactcaccaacgattatctcaaccagtttcag
gcggttgtgctgaccaactccagtctggaggagcagcagcgtgttggggagtactgccac
agcaagaacatcaagctgataatcgcagacacgcgcggactgtttgggcagctgttctgt
gattttggggaggatatggtggtgtttgaccccaatggcgaggagcccctcagcgccatg
atctccatgatcactaaggactcagctggcgtggtgacatgtctcgatgaggctcgtcat
ggatttgagagtggcgacagtgttaccttcacagaggttcagggcatgaccgatctcaac
ggttgccagccaatagaaatcaaagcccttggtccctacacattcagcatctgtgacacg
acgtccttctctgactacgtaaggggtggcatcgtcacccaggtcaagatacccaagaag
atttcctttaaatcgctgtcgtcctccttgaccgagccagagttcatactgaccgacttc
gccaagtttgaccgtccaggccagctacacgtgggtttccaggctctgcacgccttcgag
aagaagaacagccggccgcccaagccctggaacaaggcggacgcagaagagctggtggca
ctggccggagaggtgaatagcagccagactggctctgccaagcaggagcagcttgacgag
gcgctcataaaaaagctggcctctgtgtctgctggcgacctggcccccgtcaacgctttc
atcggtgggctggctgcccaagaggtcatgaaggcctgcacagggaagttcatgcccatc
atgcagtggctgtattttgatgcgctggagtgcctgcctgaaactgaagaactcatgccc
acagaggaggaggctgcacctaggaattgtaggtatgatggacagtgtgctgtatttggg
accgcacttcaggagttgctcttcaagcaacgctacttcctggttggtgctggagccatc
ggctgtgagctcctgaagaactttgccatgatgggcctggctggcggtgagggagagatc
attgtcacagacatggacaccatcgagaagtccaacctcaacaggcagttcctcttcaga
ccctgggatgtcacgaagatgaagagtgataccgccgcagccgccgtcaagcacatgaac
ccgtcggtccgcatcactggccaccagaaccgggtcggacctgaaacagagagggtctac
gacgatgacttctttgagagcctcaatggtgtggccaacgccttggacaatgttgatgcc
cgtatgtacatggaccgcaggtgtgtgtactaccgtaagccgctgctggagtcaggcact
ctgggcaccaaagggaacgtacaggtggtcatccccttcgtcacagagtcctacagctcc
agccaggacccgccagagaagtccatccccatctgcacactcaagaacttccccaacgcc
atcgaacacacgctgcagtgggcccgtgatgagtttgagggactcttcaaacagccagca
gagaacgccatgcagtatctgacagaccccaagttcatggagcgtactctgaagttgcct
ggcgcccagcccctggaggtcctggaggccgtctacaagagcctggtgactgactgtcct
cgcaactgggaagaatgcgtcacctgggcacgccaccactggcagtgccagtacagtaac
aacatccgccagctgctgcacaacttcccaccagaccagctcaccagctcaggtgctcca
ttctggtctggtccaaagaggtgtcctcatccactggagttcgacaccagcaacgagctg
cacatggactacgtcatggctggagccaacctgttagctatgtcctacggcatgcccgtc
tccagagaccgcgccaacgtggtccggatactgcaggaactcaaagtgcccacattcacg
cccaagtccggggtcaaaatccacgtgtccgaccaggagctccagaactccaacgcctca
gtgggcaactcagacgactgcaggctggaggagctgaagacactgctgcctgcggctgaa
tcggcgtctaagttcaaactctgtgccatcgaatttgagaaggatgatgacaccaacttc
cacatggacttcatcgtagcagcgtccaactcgagggcagagaactatgacatcgctcct
gcagacagacacaagagcaagctcatcgctggaaagatcattccggccattgccacgacg
acagcggcggtggtaggcctggtgtgtctggagctgctgaaggtggtgcagaaacacaag
aagttggactctttcaagaacggcttcatgaacctcgccctgcccttcttcgcctattcc
gagcccatcgccgcacccaaacacaagtactatgagattgactggacgctgtgggaccgc
tttgaggttaaaggcatgcagcccaggggggaggagatgaccctcagagagttccttgac
tactttaagaatgagcacaagctggagatcaccatgctgtcccagggcgtctccatgctc
tactcattcttcatgcctgctgccaaactcaaagagaggctggaccttccgatgactgag
attgtgaccaaggtgtccaagaaaaagctgggcaagcacgtcaaggcgctggtgttcgag
ctctgctgcaacgacgagacagacgaggacgtggaggtgccctacgtcagatacaccatt
cgctga
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integrated database retrieval system
