Clupea harengus (Atlantic herring): 105890653
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Entry
105890653 CDS
T09045
Symbol
uba1
Name
(RefSeq) ubiquitin-like modifier-activating enzyme 1 isoform X1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105890653 (uba1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105890653 (uba1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105890653 (uba1)
Enzymes [BR:
char01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
105890653 (uba1)
Ubiquitin system [BR:
char04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
105890653 (uba1)
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105890653 (uba1)
Exosomal proteins of other body fluids (saliva and urine)
105890653 (uba1)
Exosomal proteins of colorectal cancer cells
105890653 (uba1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_UFD
E1_FCCH
E1_4HB
Viral_DNA_Zn_bi
Motif
Other DBs
NCBI-GeneID:
105890653
NCBI-ProteinID:
XP_012672169
Ensembl:
ENSCHAG00000017679
UniProt:
A0A6P3VHV8
LinkDB
All DBs
Position
4:complement(7274299..7297726)
Genome browser
AA seq
1061 aa
AA seq
DB search
MSSSPLSKKRRLSGSETKTGSHCSSSNSVRTELPYTPSNGMAKNGSDAEIDEGLYSRQLY
VLGHEAMKRMQTSNVLISGLRGLGVEIAKNVILAGVKSVTLHDQGIAEWRDLSSQFYLRE
ADLGKNRADVSQTRLAELNSYVPVVSYTGTLTNDYLNQFQAVVLTNSSLEEQQRVGEYCH
SKNIKLIIADTRGLFGQLFCDFGEDMVVFDPNGEEPLSAMISMITKDSAGVVTCLDEARH
GFESGDSVTFTEVQGMTDLNGCQPIEIKALGPYTFSICDTTSFSDYVRGGIVTQVKIPKK
ISFKSLSSSLTEPEFILTDFAKFDRPGQLHVGFQALHAFEKKNSRPPKPWNKADAEELVA
LAGEVNSSQTGSAKQEQLDEALIKKLASVSAGDLAPVNAFIGGLAAQEVMKACTGKFMPI
MQWLYFDALECLPETEELMPTEEEAAPRNCRYDGQCAVFGTALQELLFKQRYFLVGAGAI
GCELLKNFAMMGLAGGEGEIIVTDMDTIEKSNLNRQFLFRPWDVTKMKSDTAAAAVKHMN
PSVRITGHQNRVGPETERVYDDDFFESLNGVANALDNVDARMYMDRRCVYYRKPLLESGT
LGTKGNVQVVIPFVTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQPA
ENAMQYLTDPKFMERTLKLPGAQPLEVLEAVYKSLVTDCPRNWEECVTWARHHWQCQYSN
NIRQLLHNFPPDQLTSSGAPFWSGPKRCPHPLEFDTSNELHMDYVMAGANLLAMSYGMPV
SRDRANVVRILQELKVPTFTPKSGVKIHVSDQELQNSNASVGNSDDCRLEELKTLLPAAE
SASKFKLCAIEFEKDDDTNFHMDFIVAASNSRAENYDIAPADRHKSKLIAGKIIPAIATT
TAAVVGLVCLELLKVVQKHKKLDSFKNGFMNLALPFFAYSEPIAAPKHKYYEIDWTLWDR
FEVKGMQPRGEEMTLREFLDYFKNEHKLEITMLSQGVSMLYSFFMPAAKLKERLDLPMTE
IVTKVSKKKLGKHVKALVFELCCNDETDEDVEVPYVRYTIR
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctcgccgctgtccaagaagcgtcgcttgtcaggatcagagacgaagacggga
tcccattgctcctcctcaaactctgtcagaactgaactgccctacacaccctctaacggc
atggctaagaatggcagtgatgctgagattgatgaaggcctgtactctcgacagctgtat
gtgctcggccatgaggccatgaagcgcatgcagacctccaacgtcctcatctcaggactg
cgtggcctcggcgtcgagatcgccaagaatgtcatcctggctggagtcaagagtgtcacc
ctgcacgaccagggcatcgccgagtggcgggacctttcctcacagttctatctgcgcgag
gcagacctggggaagaaccgcgctgacgtcagccagacccggctggccgagctcaacagc
tatgtgcctgtggtctcttacaccggaacactcaccaacgattatctcaaccagtttcag
gcggttgtgctgaccaactccagtctggaggagcagcagcgtgttggggagtactgccac
agcaagaacatcaagctgataatcgcagacacgcgcggactgtttgggcagctgttctgt
gattttggggaggatatggtggtgtttgaccccaatggcgaggagcccctcagcgccatg
atctccatgatcactaaggactcagctggcgtggtgacatgtctcgatgaggctcgtcat
ggatttgagagtggcgacagtgttaccttcacagaggttcagggcatgaccgatctcaac
ggttgccagccaatagaaatcaaagcccttggtccctacacattcagcatctgtgacacg
acgtccttctctgactacgtaaggggtggcatcgtcacccaggtcaagatacccaagaag
atttcctttaaatcgctgtcgtcctccttgaccgagccagagttcatactgaccgacttc
gccaagtttgaccgtccaggccagctacacgtgggtttccaggctctgcacgccttcgag
aagaagaacagccggccgcccaagccctggaacaaggcggacgcagaagagctggtggca
ctggccggagaggtgaatagcagccagactggctctgccaagcaggagcagcttgacgag
gcgctcataaaaaagctggcctctgtgtctgctggcgacctggcccccgtcaacgctttc
atcggtgggctggctgcccaagaggtcatgaaggcctgcacagggaagttcatgcccatc
atgcagtggctgtattttgatgcgctggagtgcctgcctgaaactgaagaactcatgccc
acagaggaggaggctgcacctaggaattgtaggtatgatggacagtgtgctgtatttggg
accgcacttcaggagttgctcttcaagcaacgctacttcctggttggtgctggagccatc
ggctgtgagctcctgaagaactttgccatgatgggcctggctggcggtgagggagagatc
attgtcacagacatggacaccatcgagaagtccaacctcaacaggcagttcctcttcaga
ccctgggatgtcacgaagatgaagagtgataccgccgcagccgccgtcaagcacatgaac
ccgtcggtccgcatcactggccaccagaaccgggtcggacctgaaacagagagggtctac
gacgatgacttctttgagagcctcaatggtgtggccaacgccttggacaatgttgatgcc
cgtatgtacatggaccgcaggtgtgtgtactaccgtaagccgctgctggagtcaggcact
ctgggcaccaaagggaacgtacaggtggtcatccccttcgtcacagagtcctacagctcc
agccaggacccgccagagaagtccatccccatctgcacactcaagaacttccccaacgcc
atcgaacacacgctgcagtgggcccgtgatgagtttgagggactcttcaaacagccagca
gagaacgccatgcagtatctgacagaccccaagttcatggagcgtactctgaagttgcct
ggcgcccagcccctggaggtcctggaggccgtctacaagagcctggtgactgactgtcct
cgcaactgggaagaatgcgtcacctgggcacgccaccactggcagtgccagtacagtaac
aacatccgccagctgctgcacaacttcccaccagaccagctcaccagctcaggtgctcca
ttctggtctggtccaaagaggtgtcctcatccactggagttcgacaccagcaacgagctg
cacatggactacgtcatggctggagccaacctgttagctatgtcctacggcatgcccgtc
tccagagaccgcgccaacgtggtccggatactgcaggaactcaaagtgcccacattcacg
cccaagtccggggtcaaaatccacgtgtccgaccaggagctccagaactccaacgcctca
gtgggcaactcagacgactgcaggctggaggagctgaagacactgctgcctgcggctgaa
tcggcgtctaagttcaaactctgtgccatcgaatttgagaaggatgatgacaccaacttc
cacatggacttcatcgtagcagcgtccaactcgagggcagagaactatgacatcgctcct
gcagacagacacaagagcaagctcatcgctggaaagatcattccggccattgccacgacg
acagcggcggtggtaggcctggtgtgtctggagctgctgaaggtggtgcagaaacacaag
aagttggactctttcaagaacggcttcatgaacctcgccctgcccttcttcgcctattcc
gagcccatcgccgcacccaaacacaagtactatgagattgactggacgctgtgggaccgc
tttgaggttaaaggcatgcagcccaggggggaggagatgaccctcagagagttccttgac
tactttaagaatgagcacaagctggagatcaccatgctgtcccagggcgtctccatgctc
tactcattcttcatgcctgctgccaaactcaaagagaggctggaccttccgatgactgag
attgtgaccaaggtgtccaagaaaaagctgggcaagcacgtcaaggcgctggtgttcgag
ctctgctgcaacgacgagacagacgaggacgtggaggtgccctacgtcagatacaccatt
cgctga
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