Clupea harengus (Atlantic herring): 105890686
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Entry
105890686 CDS
T09045
Symbol
itga2b
Name
(RefSeq) integrin alpha-IIb
KO
K06476
integrin alpha 2B
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04510
Focal adhesion
char04512
ECM-receptor interaction
char04810
Regulation of actin cytoskeleton
char04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105890686 (itga2b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105890686 (itga2b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
105890686 (itga2b)
04810 Regulation of actin cytoskeleton
105890686 (itga2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105890686 (itga2b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105890686 (itga2b)
04515 Cell adhesion molecules [BR:
char04515
]
105890686 (itga2b)
04090 CD molecules [BR:
char04090
]
105890686 (itga2b)
Protein phosphatases and associated proteins [BR:
char01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105890686 (itga2b)
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105890686 (itga2b)
Cell adhesion molecules [BR:
char04515
]
Integrins
Integrin alpha subunits
105890686 (itga2b)
CD molecules [BR:
char04090
]
Proteins
105890686 (itga2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
105890686
NCBI-ProteinID:
XP_031423304
Ensembl:
ENSCHAG00000019890
UniProt:
A0A6P8FCV2
LinkDB
All DBs
Position
1:10801148..10821867
Genome browser
AA seq
1062 aa
AA seq
DB search
MREERRCLTGGLHLRLLLLVIAPDVHRALNINQNNVTVYSGPEGSYFGFSVDFFQITGQG
VSLVVGAPQANSTQTKVEEGGEVYLCPWSADGGTCQSMEFDQKGDEEYKVADLTLKGSKS
HQWFGASVRATDKYILACAPLFHWNVLNSFNESQNTPVGNCFLKDVTTGQVSVYSPCREI
YVEFHYKSTRYVNDKRYCEAGFSVDITQNGTVVLGAPGSLYFQGQIFTATLEELTDIKRR
PRTYTYLPSKGVGREMNAYAFQEIYSDIYSGYSVATGFLTGDNIQDYLVGFPNDRDTSGT
VRIYNGRLELKKKLLGTQVAAYFGHAVAVTDINNDGREDILIGAPLFIEQLANQQQREVG
QVYVHLQQVRSKFNARPDQTLTGSVPYGRFGASIAPLGDLDKDGYNDVAVGAPSFDGNGR
VFIYMGRSEGLSPQHAQVLESPFPSPHTPSAFGYTLRGGTDVDDNGYPDLIVGAWGASKI
AVYRTLAVVNAKAQLTLSPDVLNPEEKTCSTTRTKKSVTCFTVIMCISVSGHRIPKSLAL
SVELQLDKMKQALTRRTLLLHNGQPQESVTHTVQTAHPNTCFNVTAYLRAESEFKDKLSP
IFISVNYTLIDTEDAILQGQTSAMAQTRIILDCGPDNICIPDLKLTASAETSRLLIGDEN
PALLVVEAENQGEGAYETELHISPPTSTHFQGMAAHREGFSRLNCAQRKDNGSVIVVCDL
GNPMPSGQKLKAGLLFSVGNLEEVERDVTFHMQIKSKNSHNPDSDPVLLKINVTASATLE
MQGASSPMEVVLPIANWEPVERPASLEQVGPYVEHVYMLRNLGPSAVNVKAVMEFPTHRQ
GSTLLYAFATDSENFLSCSANNASVDPDRLVRAESTVNRTTRGGHQINKREAQTDTPQNP
QAQMSRETIHVNCSSEDPCVRVECEVKGLKRQGIAVVRVMARLWVNTFSERPNENYILQS
NAHYQVVGMPSKIQPQELPSGQAETHTSVVWREEIKKVPVWWIVVAIASGLLLLALLSYI
FWKVGFFNRNRPPCDDDDEDDDTQNLSPEQTEYADVKSPQDT
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgagggaagaaagaaggtgtctaactggggggctacatctgcggctactcctccttgtc
atcgcacctgatgtgcatcgagccctgaacatcaaccagaacaacgtgacagtgtacagc
gggccagagggcagttatttcggcttctctgtggacttcttccagatcacaggtcaaggc
gtgagcctagtggtgggggccccgcaggcgaactcaacccagacaaaggtggaggagggg
ggggaggtttacctctgcccttggtcagcagacggtgggacatgccaaagcatggagttc
gatcaaaagggcgatgaggagtacaaagtcgccgatctcacactgaaggggtctaaatcg
catcagtggtttggagcgagtgtgcgagccacagacaaatacatcttggcctgtgccccg
ctgttccactggaatgtcctcaacagctttaatgagtcccagaacactccggtggggaac
tgcttcctgaaggacgtcaccactggccaggtgtccgtctattccccctgcagagaaatc
tatgtggagtttcactacaagtccaccagatatgtgaatgacaagcgctactgtgaagcg
gggtttagtgtggacatcacacagaatggaacagttgtgcttggtgcccctggaagtctg
tactttcaaggtcaaattttcacagcaaccctggaagaactaacagacataaagagacga
cccagaacttacacctaccttccatctaagggcgttgggcgtgaaatgaacgcttatgct
tttcaggaaatctattcagacatatacagtggttactctgttgcaactggctttctgact
ggggacaacattcaagattatttagttggtttccctaatgaccgtgacacatcaggaacg
gtcagaatctacaacggaagacttgaattgaaaaagaagctcttaggaactcaggtggca
gcctatttcggtcatgctgtggcggtgactgacatcaacaacgatgggagagaggacatc
ctgattggagcaccgctcttcatcgagcagctagccaatcagcagcagcgcgaggtgggc
caggtgtatgtccacctgcagcaggttcgctccaagttcaacgcccgcccggaccagacg
ctgacgggctcggtcccgtatggacgcttcggagcgtccatcgcccctctgggagacctg
gacaaagatggctacaatgatgtggcggtgggtgctccatcttttgatgggaacggccgt
gtgtttatctacatggggcggagtgagggtctctcacctcagcatgcccaggtcctggag
agccccttcccctccccacacaccccctccgccttcgggtacaccctcagggggggcact
gatgtggatgacaacggatacccggatcttattgttggtgcatggggtgccagtaagata
gctgtatatagaactcttgccgttgtgaatgccaaggcccagcttaccctctcccctgac
gtgctaaacccagaggagaagacctgctcaaccaccaggactaagaagtcagttacctgt
ttcactgtcatcatgtgcatcagtgtctctgggcatcgtatccccaaatcactggccttg
agtgtagagctgcagctggacaagatgaagcaggctctcacccgtaggaccctactgctc
cacaatggccagccacaggagagtgtcacacacacagtccagacagcacaccccaacacc
tgcttcaacgtgaccgcttacctgagggcagagtcagagtttaaagacaagctcagtcct
atctttatttcagtcaactacacactgattgacactgaagacgccattcttcaaggccag
acctcagccatggcacagacacgcatcatcctagattgtggtcctgacaacatctgtatc
ccagacctgaagttgactgcttctgccgagacgtctcgcctgctgattggagacgagaac
ccggccctgctggttgtcgaggcggagaaccagggggagggggcctatgagacggagctg
cacatcagcccccccaccagcacccacttccagggcatggccgcacacagggagggcttc
agcagactgaactgtgcccagaggaaggacaatggctctgtaattgtagtgtgtgaccta
ggaaaccctatgccatctggccagaagctgaaggcgggcctgctcttcagtgtagggaac
ctggaggaggtggagagagacgtcaccttccacatgcagatcaaaagtaagaacagtcat
aaccctgacagtgaccctgtccttctgaagattaatgtgacagcctcagccacactggag
atgcaaggagcctcctcacccatggaggttgttctgcccattgctaattgggagcctgta
gagcgcccagcctctctggagcaggtggggccgtacgtggagcatgtctacatgctgcgg
aacctgggccccagtgcggtgaacgtgaaggcggtgatggagttccccacgcaccgccag
ggatccaccttgctctatgcctttgccactgactctgagaacttcctgtcctgttccgcc
aacaatgccagcgtcgaccccgacaggctggtgagagcagagtccacagtgaaccgaacc
acccgggggggccaccagatcaataagagggaggcccagacagacactccccaaaaccct
caagcacagatgtccagggaaaccatccatgtgaactgctcctctgaggacccgtgtgtg
agggtggagtgtgaggtgaaggggttgaagaggcaaggcatcgctgtggtgagggtcatg
gcccggctctgggtcaacaccttctcagagaggccaaatgagaactacatcctgcaatcc
aatgcccactaccaggtggtggggatgccctcaaagatccagccccaggagctgcccagc
ggtcaggcagagacccacactagtgttgtctggagggaggagataaagaaggtgccggtg
tggtggatcgtcgtggccattgcttctggactcctgctattggccctgctcagctacata
ttctggaaggtgggcttcttcaaccgcaaccggcctccgtgtgatgacgacgacgaagat
gatgacacacagaatctcagccctgagcagacggagtatgctgatgtaaagtcaccccag
gacacctga
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integrated database retrieval system
