Clupea harengus (Atlantic herring): 105890739
Help
Entry
105890739 CDS
T09045
Symbol
chst12a
Name
(RefSeq) carbohydrate sulfotransferase 12
KO
K04742
chondroitin 4-sulfotransferase 12 [EC:
2.8.2.5
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
105890739 (chst12a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
char01003
]
105890739 (chst12a)
Enzymes [BR:
char01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.5 chondroitin 4-sulfotransferase
105890739 (chst12a)
Glycosyltransferases [BR:
char01003
]
Unclassified
Sulfotransferases
105890739 (chst12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_2
Motif
Other DBs
NCBI-GeneID:
105890739
NCBI-ProteinID:
XP_012672267
Ensembl:
ENSCHAG00000027030
UniProt:
A0A6P3VHZ8
LinkDB
All DBs
Position
1:8406747..8413512
Genome browser
AA seq
437 aa
AA seq
DB search
MEYPPSKSDKMGKSRLFRIFLILGSVFMILLIIIYWDDVGATHFYLHTTISGPHTSRQPP
EGNPDPKPKPGADKEPSFLSDIDAFVNQFLVGTADPTEQVRGEHLAGDAQNQSNESKSDE
KFVPRREWKIHLTPVALEMKQRQEERRRMVRDLCSANSTLDFPGKNRTFDDIPNKELDHL
IVDDRHGIIYCYVPKVACTNWKRIMIVLSESLLVDGVPYQDPLDVPTELIHNSSLHFTFN
KFWKRYGKFSRHLMKIKLKKYTKFLFVRDPFVRLISAYRNKFEQENEEFYKRFAVVMLKR
FGNYSDPPASVVDAFAAGIKPTFSNFIQYLLDPNTEKEAPFNEHWRQMYRLCHPCQINYD
FVGKLETLDDDAEHLLRILRVDNVVQFPSSHRNRTVSSWEQDWFANIPYESRREVYKLYE
ADFRLFGYAKPEKLLHE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggaataccctccgtcgaaatcagacaaaatgggaaaatcaagactgtttcgcatcttt
ctgatcctgggctccgtgttcatgatcctgttgatcattatctactgggacgatgtgggg
gcgacccacttctacctgcacaccaccatatctggtcctcacacctcccggcagcccccg
gagggtaaccccgatcccaaacccaagccaggtgcggacaaagagccctctttcctgtcg
gacattgatgcctttgtcaaccagttcctggttggcactgcagaccccactgagcaggtg
agaggggagcacctcgccggcgatgctcaaaaccagtccaacgaatccaagtcggacgag
aagtttgttcccaggcgggagtggaagatccacctgaccccggtcgccctggagatgaaa
cagagacaagaggagaggagacggatggtccgcgacctctgcagcgccaacagcacgttg
gatttccctggcaagaacaggacgtttgacgacataccgaacaaggagctggaccatctc
atcgtggacgaccggcacgggatcatctactgctacgtgcccaaggtggcgtgcaccaac
tggaagcgcatcatgatcgtgctgagcgagagcctgctggtggacggcgtgccttaccag
gacccgctggacgtccccaccgagctcatccacaacagcagcttgcacttcaccttcaat
aagttctggaagcgctacggcaagttctcacgccacctgatgaagatcaagttaaagaag
tacaccaagttcctgttcgtccgtgacccctttgtcaggctcatctccgcctaccggaac
aagttcgaacaggagaacgaggagttctacaagaggttcgctgtggtcatgctgaagcgc
tttggaaattactcagaccccccggcatcggtcgtggatgcgtttgctgctggcatcaag
cccactttctccaacttcatccagtaccttctggaccccaacacggagaaggaggcgccc
ttcaatgagcactggagacagatgtaccgcctgtgtcatccttgccagataaactacgac
ttcgtggggaagctggagaccctggatgacgacgcagagcacttgctaagaatcctgcgc
gtcgacaacgtggtccagttcccgtcgagccatcggaaccgaaccgtgagcagctgggag
caagattggtttgccaacattccttacgagtcacggagagaagtctacaagctctatgag
gctgacttcagactgtttggatatgccaaacctgagaaacttttacatgagtga
DBGET
integrated database retrieval system
