KEGG   Clupea harengus (Atlantic herring): 105890789
Entry
105890789         CDS       T09045                                 
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04137  Mitophagy - animal
char04144  Endocytosis
char04145  Phagosome
char04148  Efferocytosis
char05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:char00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    105890789 (rab5c)
   04145 Phagosome
    105890789 (rab5c)
   04137 Mitophagy - animal
    105890789 (rab5c)
   04148 Efferocytosis
    105890789 (rab5c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    105890789 (rab5c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:char04131]
    105890789 (rab5c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:char04147]
    105890789 (rab5c)
   04031 GTP-binding proteins [BR:char04031]
    105890789 (rab5c)
Membrane trafficking [BR:char04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    105890789 (rab5c)
 Endosome - Lysosome transport
    105890789 (rab5c)
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   105890789 (rab5c)
  Exosomal proteins of other body fluids (saliva and urine)
   105890789 (rab5c)
  Exosomal proteins of colorectal cancer cells
   105890789 (rab5c)
  Exosomal proteins of bladder cancer cells
   105890789 (rab5c)
GTP-binding proteins [BR:char04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    105890789 (rab5c)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase MCR_beta AAA_16 BrnT_toxin
Other DBs
NCBI-GeneID: 105890789
NCBI-ProteinID: XP_012672323
Ensembl: ENSCHAG00000004782
UniProt: A0A6P3VHX4
LinkDB
Position
1:complement(9143837..9157871)
AA seq 220 aa
MAGRGGPARTNGAAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQGGAGAGGRARGGVDLQEAAPQSRSSQCCGGGN
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcgggtcgtggaggaccagcacggaccaatggggcggccgcgggcaacaagatatgc
cagttcaaactggttctactaggggagtctgctgtgggcaaatccagcctggtgctgcgc
ttcgtcaaaggacagttccacgagtaccaggagagcaccatcggagctgcgtttctcaca
cagactgtttgtttggatgacacgacggtaaagtttgagatctgggacacggcaggacag
gagcgttatcacagtctggccccaatgtactacagaggcgcgcaagcggccatcgtagtc
tacgacatcaccaacacagacacattcactcgtgcgaagaactgggtgaaggagctgcag
agacaggccagccccaacatagtcattgcgctggcagggaacaaggctgacctcgccaac
aagagagccgtagatttccaggaagcacaagcctatgcagacgacaatagcctgctcttc
atggaaacttctgccaaaactgcgatgaacgtcaatgagattttcatggccatagcaaag
aaactgccgaagaatgagccacagggcggagctggagccggaggacgcgcaaggggcgga
gtcgaccttcaggaggcggcccctcagagcagaagtagccagtgctgcggcggcgggaac
taa

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