Clupea harengus (Atlantic herring): 105890854
Help
Entry
105890854 CDS
T09045
Symbol
npas4l
Name
(RefSeq) neuronal PAS domain-containing protein 4-like isoform X1
KO
K26457
neuronal PAS domain-containing protein 4
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105890854 (npas4l)
Transcription factors [BR:
char03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
105890854 (npas4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
HLH
Motif
Other DBs
NCBI-GeneID:
105890854
NCBI-ProteinID:
XP_031435352
Ensembl:
ENSCHAG00000018893
UniProt:
A0A6P8GIS9
LinkDB
All DBs
Position
13:5385090..5391392
Genome browser
AA seq
781 aa
AA seq
DB search
MTVYCESCKSSESARRGSFSSSPHRTETICQKFCRRFRSTKGASKARRDQMNGEIRNMRT
LLPIPQEDQERLSYLHSMSVICTYIRKSVLYKVRSEARQADSFLPCDFLQALPGFILVMT
REGKMVYVSENVSDYLGLSMVDILQGDTFYDMIDSSCEDLVRENLETDTCPLRDVSFVCQ
MHTSKAFRLQHGSHCTLSVRGRFQAGPQSSLFVALCTPTVNRLHEANLPCHSPRFQTLHR
PDMSFKHAPRSVFFQTGHTSEELAGQSWYSLIHPEDLSIAACAHKSMIELMDEPQVEMVL
RLQCKDLSWTWLYICAVKYAGKDEIACTNYIISETEAIFLKQNIHNNALRVPMKSFSSPP
ASQMPLSPEGCTNRSPKRRRNSGQLVEESRKKTRLPEPSMNVVMCDHHLGNQDSLSVHLG
HGTTVFSSPPYSPASSQSPPMQEEPNPDYFLDEQYNFTEGLLSPPSGSPHYSPPSSSMVD
PEPSGTFAPTPAPQSFHSEAFHSGSFNVVSTPTSSGPHPVYGFPDCAGDSCLVPDYQPLL
EVYESQAECILHPEDFSLLPVAPLDMGASEPSQVLPPASHQAPPLTPEAPPGVHMQFHYS
ERGLKHEQVEISLLAHQISSLASSFNAYCSQALAPGNASPQHQEPPLAWPQHALPHYLPS
AGSEPVLDEGTIDCILKDLDGVFGKVEGWVQPEVSQFSRRTLAQSQDLSLAALVDCLPMD
EFDSANTTSDPLILRSECRDQNTGLHQLNQYAHCSIPQGNHGYQIHYSYTAQESPFKNSL
S
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgacagtctattgtgaatcttgcaaaagttctgaaagcgcaagacgaggctccttctca
agttctccccatcgcacggagactatctgtcagaaattctgcagaagatttaggtccact
aagggggcctccaaagcccggcgggatcagatgaacggagagatccggaacatgcgtacc
ttactgcccatcccacaagaggaccaggaacggctctcatacctccactccatgtccgtc
atctgcacctacatcaggaagtccgtcctctacaaagttcgatcagaggcaagacaggcc
gactccttccttccctgtgattttctgcaagccctccctggctttatcttggtcatgacc
agagaagggaagatggtgtacgtgtctgaaaatgtgtcagactacttgggtctctccatg
gttgacattcttcaaggagacacattctacgacatgattgacagttcctgtgaggacctt
gtcagggaaaatttagagacagatacctgtccattgagagacgtatcctttgtgtgtcag
atgcacacttccaaggcattccggctccagcacggcagccactgcactctctcggtgcga
ggacgtttccaggccggcccacaatcctccctgtttgtggccttgtgcacgcccacggtg
aaccggctacatgaggccaacctcccgtgccacagcccccgcttccaaaccctccacagg
ccagacatgtcgttcaagcacgccccccgcagtgtgtttttccaaacgggccacacttca
gaggagttggctggtcagtcatggtacagcctgatccatcctgaggacctgtccattgct
gcctgtgcacacaaaagcatgattgagctaatggacgaaccacaggtggagatggtgttg
aggctgcagtgtaaggacctttcatggacttggctttacatctgtgctgtcaagtatgct
gggaaagatgaaattgcatgcacaaactacatcatcagtgaaacagaggccatctttctc
aagcaaaacatccacaataatgccttaagagtgcccatgaagtcattcagcagtcctcca
gcttcccagatgcctttgagccccgagggctgcacaaacaggtccccaaaaagacggcgg
aactctggccagctggttgaagaatcgagaaaaaagactcggctaccagagcccagcatg
aatgttgtcatgtgcgaccatcaccttggcaaccaagacagcctctctgtgcacctggga
catggtaccacagtgttctccagccctccttacagcccggcctcctctcagtctcccccc
atgcaggaggagcccaacccagactacttcttggacgagcagtacaactttacagaaggg
ttactgtcgccccctagtgggtcaccccattatagcccccccagcagcagcatggtggat
ccagagccttcgggcacttttgccccgactccagcgccccagagcttccacagcgaggct
tttcactccggctcctttaatgtggtgtccacccctacctcgtctggtccgcatcccgtg
tacggtttcccggactgcgcgggcgactcgtgtcttgtccctgactaccagcctctgttg
gaggtctacgagagccaggctgagtgtatcctccatccggaggacttcagcttgctgcct
gtggctcctctggatatgggggcgtctgagccttcccaggtgctgccaccggcatcgcac
caagccccccctctgaccccagaggcccccccaggtgtccacatgcagttccactacagc
gagcgtgggctcaagcacgagcaggtggagatcagcctactggctcaccagatctcctca
ctggccagcagcttcaacgcctactgctctcaggccctggcccctgggaacgcctctccc
cagcatcaggagcccccgctggcctggccccagcacgctctcccccattacctacccagc
gctggctcagagcctgtgctggacgagggcacaatcgactgcatccttaaggacctggat
ggggtgtttgggaaagttgagggctgggtgcagccagaggtctcccagtttagcaggcgc
accctggcccagtcgcaggacctgtctctggccgctctggtggactgtctccccatggac
gagtttgactccgccaacacgacttctgatccactcatcctgaggtcagaatgccgggac
caaaacactgggttgcatcaactcaaccagtatgcccactgcagcattccacaaggtaac
cacggctaccaaatacactactcttacactgcacaagagagtccctttaaaaacagtctt
tcatga
DBGET
integrated database retrieval system
