Clupea harengus (Atlantic herring): 105890918
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Entry
105890918 CDS
T09045
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03430
Mismatch repair
char03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105890918 (mlh1)
03460 Fanconi anemia pathway
105890918 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
char03400
]
105890918 (mlh1)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
105890918 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
105890918
NCBI-ProteinID:
XP_012672471
Ensembl:
ENSCHAG00000009405
UniProt:
A0A6P3VI46
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Position
13:complement(7117492..7125372)
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AA seq
742 aa
AA seq
DB search
MAGVIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVTVKEGGLKMIQIQD
NGTGIRKEDMEIVCERFTTSKLQTFEDLSTIATYGFRGEALASISHVAHVTITTKTADAK
CAYRANYSDGKPKAPPKPCAGNQGTQITVEDLFYNINTRRKALKNPSEEYSRIVEVMSRY
AIHNSGKSFTVKKQGEMVADVKTLLNATILDNIRVVFGVNVSRELIEVGCEDQKLAFKFN
GYISNANYSVKKCILILFINHRLVESSALKKAIEVVYAAYLPKNTHPFLYLSLEIAPHNI
DVNVHPTKHEVHFLHEDCIIESVQKHVESKLLGSNSSRTYFTQTLLPGLPVSTSDLKPSG
SASDASDRVYAHQMVRTDSKAQKLDAFLQPVGKLPPVKSSSSSSLSLFSSVPGTSSAPPA
ASAELQDEEMLEALEEVDPTDAETMETSTAEAEAAPRKRPRVNQEEEELTAAATPKRRAI
KLSSVRELREEITEKNHKGLQEMLQNLTFVGCVSPRWTLVQHHTKLYLLNTTKLSQELFY
QILVYDFGNFGVLRLSSPAPLYELAMLALNSEESGWTEEDGPKEGLAEFIVDFLRKKSEM
LEDYFSLEIDEEGNLTGLPLLMDNYVPAMEGLPMFILRLATEVNWDNERDCFHDFGRECS
QFYSIRKEYTLDTETQPQIQEEETGAAEDPEAEATPSWRWQVEHLLFKGFRTLFSPPKRF
SEDGSVLQIANLPDLYKVFERC
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggttatccggagacttgatgaaactgtagtgaatcgtattgcggctggggaa
gttatacagaggcctgcaaacgcgattaaagaaatgattgagaactgtttggacgcaaag
tctacaaacattcaggtgaccgtaaaggaaggagggctgaagatgatccagattcaggat
aacggcacgggcattcgaaaagaggacatggaaatagtttgcgagcgtttcacaacgagc
aaactacagacgttcgaggacctgtcaaccatagcaacctacggtttcagaggagaggca
cttgccagcataagccatgtggcacatgtcacaataacaaccaaaacagcagatgcaaaa
tgtgcctacagagccaactatagtgatgggaagccgaaagccccaccaaaaccctgcgct
ggcaaccagggcactcagatcaccgtggaagatctcttctataatattaacaccaggagg
aaagctctgaagaaccctagtgaggagtactccaggattgtggaggtgatgagcaggtat
gccattcacaattctgggaagagtttcacagtcaagaagcaaggggagatggtggctgat
gtcaagactctactcaatgccaccatattggacaacattcgggtggtgtttggcgtgaat
gtgagcagggagctgatagaggttggttgtgaggatcagaagctggcttttaaattcaat
ggttatatctccaacgccaactactcagtgaagaagtgcatcctcatcctcttcatcaac
catcgcttggtggagtccagtgccctgaagaaggccatagaggtggtgtatgctgcttac
cttcctaagaacacccacccttttctttatctcagcttagagatcgccccccacaacatt
gatgtgaacgtccaccccaccaaacacgaggtgcacttcctgcatgaggactgcatcata
gagagcgttcagaagcacgtcgagagcaaactactgggctccaattcctctcgcacctac
tttacacagacgctgcttcctggtctgcccgtctccaccagcgacctcaagccctccggc
tccgcctccgatgcaagcgatcgcgtctatgcccaccagatggtccgcaccgactccaag
gcccagaagttggacgccttcctgcagcctgttggaaagcttcctcctgtcaagtcatct
tcctcctcctctttgtcattgttttcgtcagttcctggtacaagcagcgcccccccagca
gcctctgcagagctacaggatgaggagatgctggaggctctggaagaggtggaccccaca
gatgcagagaccatggagaccagcaccgctgaggctgaggctgcacccaggaaaaggcca
cgagtgaaccaagaagaggaggagcttacagcagccgccacccccaagaggcgtgccatc
aagctgtcaagtgtgagggagctcagagaggagatcacagagaagaatcacaaaggtctt
caggagatgctgcagaacttgacgtttgtgggctgtgtgagcccccgctggactctggtc
cagcaccacaccaaactctacctgctcaacaccaccaaactgagccaggagcttttctat
cagattttggtctatgattttggcaacttcggagttttgaggttatcgagccctgctccg
ctgtacgagttggccatgctggcgctgaactccgaggagagcggctggacggaggaggac
gggcctaaagaggggctggccgagttcatcgtggacttcctgcggaagaagtctgagatg
ctggaggactacttctccctggagatagatgaggagggaaacctcacaggactgcccctg
ctgatggataactatgtccccgccatggaggggctgcccatgtttatcctgcgcttagca
accgaggtgaactgggacaatgagagggattgtttccatgacttcggccgagagtgcagt
cagttctactccatcaggaaggagtacacactggacactgagacgcaaccacagatacag
gaggaagagacgggagcagctgaggacccggaggcggaagccacaccctcttggcgctgg
caagtggagcacctgcttttcaaaggcttcaggaccctcttcagcccccccaagcgtttc
agtgaagatggcagcgtgctgcagattgccaatctgcccgacctctacaaggtgtttgag
aggtgctga
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