KEGG   Clupea harengus (Atlantic herring): 105890918
Entry
105890918         CDS       T09045                                 
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
  KO
K08734  DNA mismatch repair protein MLH1
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03430  Mismatch repair
char03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    105890918 (mlh1)
   03460 Fanconi anemia pathway
    105890918 (mlh1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:char03400]
    105890918 (mlh1)
DNA repair and recombination proteins [BR:char03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     105890918 (mlh1)
SSDB
Motif
Pfam: Mlh1_C DNA_mis_repair HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 105890918
NCBI-ProteinID: XP_012672471
Ensembl: ENSCHAG00000009405
UniProt: A0A6P3VI46
LinkDB
Position
13:complement(7117492..7125372)
AA seq 742 aa
MAGVIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVTVKEGGLKMIQIQD
NGTGIRKEDMEIVCERFTTSKLQTFEDLSTIATYGFRGEALASISHVAHVTITTKTADAK
CAYRANYSDGKPKAPPKPCAGNQGTQITVEDLFYNINTRRKALKNPSEEYSRIVEVMSRY
AIHNSGKSFTVKKQGEMVADVKTLLNATILDNIRVVFGVNVSRELIEVGCEDQKLAFKFN
GYISNANYSVKKCILILFINHRLVESSALKKAIEVVYAAYLPKNTHPFLYLSLEIAPHNI
DVNVHPTKHEVHFLHEDCIIESVQKHVESKLLGSNSSRTYFTQTLLPGLPVSTSDLKPSG
SASDASDRVYAHQMVRTDSKAQKLDAFLQPVGKLPPVKSSSSSSLSLFSSVPGTSSAPPA
ASAELQDEEMLEALEEVDPTDAETMETSTAEAEAAPRKRPRVNQEEEELTAAATPKRRAI
KLSSVRELREEITEKNHKGLQEMLQNLTFVGCVSPRWTLVQHHTKLYLLNTTKLSQELFY
QILVYDFGNFGVLRLSSPAPLYELAMLALNSEESGWTEEDGPKEGLAEFIVDFLRKKSEM
LEDYFSLEIDEEGNLTGLPLLMDNYVPAMEGLPMFILRLATEVNWDNERDCFHDFGRECS
QFYSIRKEYTLDTETQPQIQEEETGAAEDPEAEATPSWRWQVEHLLFKGFRTLFSPPKRF
SEDGSVLQIANLPDLYKVFERC
NT seq 2229 nt   +upstreamnt  +downstreamnt
atggcaggggttatccggagacttgatgaaactgtagtgaatcgtattgcggctggggaa
gttatacagaggcctgcaaacgcgattaaagaaatgattgagaactgtttggacgcaaag
tctacaaacattcaggtgaccgtaaaggaaggagggctgaagatgatccagattcaggat
aacggcacgggcattcgaaaagaggacatggaaatagtttgcgagcgtttcacaacgagc
aaactacagacgttcgaggacctgtcaaccatagcaacctacggtttcagaggagaggca
cttgccagcataagccatgtggcacatgtcacaataacaaccaaaacagcagatgcaaaa
tgtgcctacagagccaactatagtgatgggaagccgaaagccccaccaaaaccctgcgct
ggcaaccagggcactcagatcaccgtggaagatctcttctataatattaacaccaggagg
aaagctctgaagaaccctagtgaggagtactccaggattgtggaggtgatgagcaggtat
gccattcacaattctgggaagagtttcacagtcaagaagcaaggggagatggtggctgat
gtcaagactctactcaatgccaccatattggacaacattcgggtggtgtttggcgtgaat
gtgagcagggagctgatagaggttggttgtgaggatcagaagctggcttttaaattcaat
ggttatatctccaacgccaactactcagtgaagaagtgcatcctcatcctcttcatcaac
catcgcttggtggagtccagtgccctgaagaaggccatagaggtggtgtatgctgcttac
cttcctaagaacacccacccttttctttatctcagcttagagatcgccccccacaacatt
gatgtgaacgtccaccccaccaaacacgaggtgcacttcctgcatgaggactgcatcata
gagagcgttcagaagcacgtcgagagcaaactactgggctccaattcctctcgcacctac
tttacacagacgctgcttcctggtctgcccgtctccaccagcgacctcaagccctccggc
tccgcctccgatgcaagcgatcgcgtctatgcccaccagatggtccgcaccgactccaag
gcccagaagttggacgccttcctgcagcctgttggaaagcttcctcctgtcaagtcatct
tcctcctcctctttgtcattgttttcgtcagttcctggtacaagcagcgcccccccagca
gcctctgcagagctacaggatgaggagatgctggaggctctggaagaggtggaccccaca
gatgcagagaccatggagaccagcaccgctgaggctgaggctgcacccaggaaaaggcca
cgagtgaaccaagaagaggaggagcttacagcagccgccacccccaagaggcgtgccatc
aagctgtcaagtgtgagggagctcagagaggagatcacagagaagaatcacaaaggtctt
caggagatgctgcagaacttgacgtttgtgggctgtgtgagcccccgctggactctggtc
cagcaccacaccaaactctacctgctcaacaccaccaaactgagccaggagcttttctat
cagattttggtctatgattttggcaacttcggagttttgaggttatcgagccctgctccg
ctgtacgagttggccatgctggcgctgaactccgaggagagcggctggacggaggaggac
gggcctaaagaggggctggccgagttcatcgtggacttcctgcggaagaagtctgagatg
ctggaggactacttctccctggagatagatgaggagggaaacctcacaggactgcccctg
ctgatggataactatgtccccgccatggaggggctgcccatgtttatcctgcgcttagca
accgaggtgaactgggacaatgagagggattgtttccatgacttcggccgagagtgcagt
cagttctactccatcaggaaggagtacacactggacactgagacgcaaccacagatacag
gaggaagagacgggagcagctgaggacccggaggcggaagccacaccctcttggcgctgg
caagtggagcacctgcttttcaaaggcttcaggaccctcttcagcccccccaagcgtttc
agtgaagatggcagcgtgctgcagattgccaatctgcccgacctctacaaggtgtttgag
aggtgctga

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