Clupea harengus (Atlantic herring): 105890936
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Entry
105890936 CDS
T09045
Symbol
smarcad1b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1b isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105890936 (smarcad1b)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
105890936 (smarcad1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
ERCC3_RAD25_C
HHH_3
T2SSK
Motif
Other DBs
NCBI-GeneID:
105890936
NCBI-ProteinID:
XP_012672506
Ensembl:
ENSCHAG00000012615
UniProt:
A0A6P3VIU3
LinkDB
All DBs
Position
12:14891697..14917393
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AA seq
933 aa
AA seq
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MSCTVVPETPESKRPSGPPLERGSSCIVLESDSGSDTELSGKSMIKDKEKQPDKNVIVLS
DQSEETEDSSDEVSHTSPQVSLERSGDSEPASKRSRAEETDGSRVSQHSPDSHPKKKRKA
SETDDSEEEGPEPSWREQEDMVKKLQRHFPHLAKEELRDVLQEHDWLYEDTLEALRMFSE
EADASAESDPPKRPSSPSPKPSRRDESPPTLRTRSVRQASQPTKATPKPAPEPPSTKRPH
RTTQLPQNVTRASRKQKRRQAASRDSESEDGAASDFDEPSSDQEDSEGEGKGRLTPQKRQ
ILRFFQESSLEELSLIEGCSAKKAQKIVELRPFRRWRDLDKALSGGNGLSVELLAGCREV
LREREVVQGLMGRCEEIAQKMSRDVTQVLESGTGSMEQPRILNDAFKLKPYQLVGLRWLT
LLFQNNLSGILADEMGLGKTIQAISFLASLYQDGNRGPHLIVVPASTLDNWVRELNLWCP
SLEVLVYHGTAEDRRFKRYEVLNNMVDYNIIVTTYNLAIGNSSDRSLFRKLKLEYAVFDE
GHMLKNMNSLRYRHLMAINAAHRLLLTGTPLQNNLLELMSLLNFIMPSMFSSSTAQIARL
FSMSSSEEQSGFERERITHAKLIMKPFILRRIKSEVLKQLPAKEELVEFCPMSTKQQQLY
GALLSKLKGATNGEKRALTNAMMQLRKMANHPLLHRQYYTSERLTLMSKLMLNELTHRDS
DPALVKEDMEVMSDFELHRLCLQFASLREFRLGSDLLLDSGKLQFLTKLLGSLKEEGSRV
VLFSQFTMMLDILEVFLKHHSHRYIRLDGSTPMADRIGLIDKFNTDQDIFVFLLSTKAGG
LGINLTSANVVILHDIDCNPYNDKQAEDRCHRLGQTRTVKVIRLISKDSIEDGMLRIGQK
KLKLEQDMTACEQGDEENMSEDMASLLKASLGL
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgagctgcacggttgtcccagagaccccggagtccaaacggcccagtgggccaccattg
gagagagggtccagttgtattgtgctggaatcagattctgggtctgacacggagctgtct
gggaaatccatgatcaaagacaaagagaagcagcctgacaagaatgtgattgttctgtca
gatcagtcagaagagactgaagacagttcagatgaggtgagccacacatcgcctcaggtc
tccctggagaggtcaggagactcggagccagcctctaagaggagtcgggcagaggaaaca
gatgggtcacgggtgtcccaacatagtcctgattcccaccccaagaagaagcggaaggct
tccgagacggacgactcggaggaggagggcccagagcccagctggcgagagcaggaggac
atggtgaagaagctgcagagacacttccctcacctggccaaggaggaactgagggatgtg
ctgcaggaacatgactggctgtatgaggacacactggaggctctgcggatgttctctgaa
gaagctgacgcgtcagccgaaagcgatcctcccaaacggccttcgtctccttctcctaaa
ccttcgagacgcgacgagtccccgcccacgctccgcacacgctccgtgagacaggcgtct
caacccactaaagccacgccaaaacctgcaccagaaccgcccagtacaaaaagaccccac
agaacaacacagctcccgcagaatgttaccagagcatcgcggaagcaaaagaggaggcag
gcggcgagccgtgattcggaaagcgaagacggagccgccagtgactttgacgagccctcc
tcagaccaggaggattctgagggagagggcaaaggtcgcttgaccccacagaagagacag
atccttagatttttccaggagtcgtccctggaggagctgtcactcatcgaaggctgctcg
gccaagaaggcccagaagatcgtggagctcaggcccttcaggaggtggcgagacctggat
aaggctctgagcggcggtaacgggctgtctgtggagctgctggcaggctgccgggaggtg
ttgcgtgagcgggaggtggtgcaggggctcatgggtcgctgcgaggagattgcccagaag
atgagccgcgacgtcacccaggtgctggagagtggcaccggatccatggagcagccacgc
atcctcaacgacgcgttcaaactgaagccgtaccagctggtgggactgcgctggctcacc
ctgctcttccagaacaacctcagcggcatcctggcagatgagatgggtttgggaaagacc
atccaggccatctccttcttggccagcctgtatcaggatggaaaccgtgggccccacctc
atcgtagtgcccgcgtccacgctggataactgggtccgtgagctgaatctgtggtgcccc
agtcttgaggtgctcgtttatcacggcacagcggaggaccgtcgcttcaaacgatacgag
gtcctcaacaacatggtagactacaacatcatcgtcaccacgtacaacctggcgataggg
aactcgagcgaccgcagcctgttccgcaagttgaagctggagtatgctgtgtttgatgaa
ggccacatgctgaagaacatgaactcactacgctaccgccacctcatggctatcaacgcg
gctcatcggttgctgctgacaggcacccccctgcagaataaccttctggagctcatgtct
ctgctcaacttcatcatgccctccatgttctccagcagcaccgcccagatcgcccgcttg
ttctccatgagctcgtctgaagagcagagcggctttgagagggagaggatcacccacgcc
aaactcatcatgaaacctttcatcctcagacgcatcaagagtgaggtcctgaagcagctg
ccggcaaaagaggagttggtggagttctgccccatgagcaccaagcagcagcagctctac
ggcgccctcctcagcaagctgaagggtgccaccaatggagagaagcgtgcgctgaccaat
gcaatgatgcagctgcggaagatggccaaccacccgctgctgcaccggcagtactacacc
tccgagcgcctgacccttatgagcaaactcatgctgaacgagctgacccaccgggactcg
gacccggccctggtgaaggaggacatggaggtgatgtcagactttgagctgcaccggctc
tgcctgcagttcgcctcgctgagggagttcaggctcggctcggacctgctgctggactcg
gggaagctgcagtttctcacgaagctgctggggtccctcaaagaggagggcagccgagta
gtgctcttcagccagttcaccatgatgctagacattctcgaggtcttcctcaagcaccac
agccaccgctacatccgattggatggctccacgcccatggctgacaggattggcctgatc
gacaagttcaacacggatcaggacatctttgtgttcctgctttccaccaaggcagggggg
ctgggcattaacctcacctctgccaatgtggtcatcttgcacgacatcgactgcaaccca
tacaacgacaaacaggcagaggatcgttgccatcgcctgggtcagaccaggacggtgaag
gtgattagactgatcagcaaagactcaatagaggacggcatgttgcgaatcggacagaag
aagctcaaactggagcaggacatgaccgcctgcgaacagggtgatgaagagaacatgtct
gaggatatggcgtctctcctcaaggcttcattaggactctga
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