KEGG   Clupea harengus (Atlantic herring): 105890946
Entry
105890946         CDS       T09045                                 
Symbol
cldn5b
Name
(RefSeq) claudin-5b
  KO
K06087  claudin
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03272  Virion - Hepatitis viruses
char04382  Cornified envelope formation
char04514  Cell adhesion molecule (CAM) interaction
char04530  Tight junction
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    105890946 (cldn5b)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    105890946 (cldn5b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    105890946 (cldn5b)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    105890946 (cldn5b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:char03037]
    105890946 (cldn5b)
   04147 Exosome [BR:char04147]
    105890946 (cldn5b)
Cilium and associated proteins [BR:char03037]
 Other cilia and associated proteins
  Stereociliary proteins
   105890946 (cldn5b)
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   105890946 (cldn5b)
  Exosomal proteins of colorectal cancer cells
   105890946 (cldn5b)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 L_HMGIC_fpl MFS_MOT1 CdpA_N DUF1634 DUF4064
Other DBs
NCBI-GeneID: 105890946
NCBI-ProteinID: XP_012672517
Ensembl: ENSCHAG00000009062
UniProt: A0A6P3VIM8
LinkDB
Position
12:complement(11088177..11089697)
AA seq 215 aa
MLSACLELLGLGFCVSGNLLVMVACGLPMWKVSAFIESNIVVAQTIWDGLWMSCVVQSTG
QMQCKVHDSVLALNKDLQMGRALTVISAVLGVMGLIFAIAGAQCTNCLKTENIKAKVVNA
GGVIYIISGLFVLIPLCWMANNIISDFYSPQVPPAKKREIGAALYIGWAGAGLLLAGGTL
LCCSCPHRLKGSYPIKYAPTKSVTQNGDYDKRNYV
NT seq 648 nt   +upstreamnt  +downstreamnt
atgctttctgcctgtttggaattgctcggcctggggttttgcgtgtctggtaatctgctg
gtgatggtggcttgcggcttgcccatgtggaaagtgtccgctttcatagagagcaacatc
gttgtggcgcagactatctgggacggactgtggatgtcctgcgtggttcagagcacaggg
cagatgcagtgcaaggtacacgattccgtcctggcattgaacaaggacctgcagatgggc
agagctctcacggtcatctccgctgtcttgggcgtgatggggctcatcttcgccatcgcc
ggtgcacagtgcaccaactgtctcaaaaccgagaacattaaggcgaaggtggtgaacgcc
ggcggggtgatctacatcatcagcggcttatttgtcctgatccctctctgctggatggca
aataacatcatctcggacttctacagcccgcaggtccccccagccaagaaacgagagatt
ggggctgcgctgtacatcgggtgggcgggcgccgggcttctgctagctggaggcacctta
ctgtgctgctcctgtccccatcgtttaaagggttcatatcctataaaatacgccccaaca
aaaagcgtcactcagaacggagactacgacaaacgaaattacgtgtaa

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