Clupea harengus (Atlantic herring): 105890988
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Entry
105890988 CDS
T09045
Symbol
dcaf5
Name
(RefSeq) DDB1- and CUL4-associated factor 5
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105890988 (dcaf5)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105890988 (dcaf5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EIPR1
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
105890988
NCBI-ProteinID:
XP_012672574
Ensembl:
ENSCHAG00000007730
UniProt:
A0A6P3VIR9
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All DBs
Position
14:9652123..9667520
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AA seq
850 aa
AA seq
DB search
MKEVMGCGMRSSVGFLSRRNITGHHLMKEEFQRRRLGGCTSLFKKDLLGHFGCVNAIEFS
NNGGDWLVSGGDDRRVLLWDMEKSIHSRAKPIKLKGEHLSNIFCLAFDSTNKKVFSGGND
EQVILHDVERGETLNVFLHDDAVYGLSVSPVNDNVFASSADDGRVLIWDTREPPHGEPFC
LASYTSAFHSVMFNPAEPRLLATANSKEGVGLWDIRKPRSSLLRYGGSLSLQSAMSVRFN
STGTQLLALRRRLPPVLYELHSRLPSVQFDNQGYFNSCTMKSCCFAGDRDQYILSGSDDF
NLYMWKIPKEPEAGGPGRVVNGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKVIKAWSP
YQQPDSLGDLEGLVEDKSRSLYTHEEYISLVLNSGSGLSHDYVSQSIQEDPRMMAFFDSL
VRREIEGWSSDSDSDLSEGAILQLHARGRRSTRSTAAASAVAAAAAASTPSAAREVGVMH
ADPSSGIVAVVANDDGPPSNSENSSSSSLAGPELSEEEDEEDEGEQAEVEVEGLSRRQRG
VRRRQSAFMLDLVNEDSDSSGFWFNPVPRPRSPSPPLDRSSLSSQSRSASESDSSSSSSS
PSSSSSSEGEEEEEQQQRRSNTRQCNAARRRVRSRMHLPSRDAEDRPATAQDLCSTLDPC
SYPKITIEDASSSSSSSGGTGCANTEKKPRGRKSRRHHRLRDDDSPVQTPGNRPETRLGG
RVSSRSPSPTDSDLRCVSRAGERDDKKRESEGGKRERAGKKDFTTSHVDFLGSQEPTRNS
EDPHQNLPGISGTAEELDDDPTDSKTREATGTSRVSKRTRQGSELRPEGSSLGSAEGSDE
GAPSEKKLKT
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggtaatgggttgtggcatgagatcgtctgtggggttcctgtcccggagaaac
atcaccgggcaccatctaatgaaggaggaattccagcgacgtaggctgggtggttgcacc
agcctgttcaaaaaggacctgctgggccattttggatgcgtgaacgctatagagttctca
aacaatggaggagactggcttgtgtccggtggagatgaccgcagggtgctgctgtgggac
atggagaagtccatccactcccgggccaagccgattaaactgaagggagagcacctgtcc
aacatcttctgcctggcgttcgacagcaccaacaagaaggtgttctctggagggaatgat
gagcaggtgatcctccacgatgtggagaggggcgagaccctcaacgtgttcctccacgac
gacgcagtgtacggcttgtctgtcagccccgtgaacgacaacgtgttcgccagctccgca
gacgacggccgagtcctcatctgggacactcgagagcccccacacggagaacccttctgt
ctggcaagctacacctcagcgttccacagcgtgatgttcaaccctgcggaacctcggctg
ctggccacagccaactccaaagagggagtggggctctgggatatccgcaagccacgcagt
tctctgttgcggtatggcgggagcctgtctctgcagagtgccatgagtgtgcgcttcaac
agcacgggcactcagctgctggcgctgcgcaggcgtctgcccccggtgctgtacgagctg
cactcgcgcctgcccagcgtccagttcgacaaccagggctacttcaactcctgcaccatg
aagagctgctgcttcgccggggacagagaccagtacatcttgtctggatctgatgacttc
aacctctacatgtggaaaatccctaaagagcctgaagcaggaggtccaggtcgtgtggtg
aacggggcctttatggttctcaaaggtcatcgctccattgtcaaccaggttcgcttcaac
cctcacacctacatgatctgctcctccggggtcgagaaggtcatcaaggcgtggagtccg
taccagcagcccgacagtcttggggacctggagggcctcgtggaggacaagtctcggagc
ctgtacacgcacgaggagtacatcagcctggtgctgaacagcggcagcggcctgtcgcac
gactacgtcagccagtccatccaggaggacccgcgcatgatggccttcttcgactcgctg
gtgcgccgtgaaatcgagggctggagctctgactcggacagcgacctgagcgagggcgcc
atcctgcagctgcacgctagggggcgccgttctacacgctctactgctgctgcctctgct
gtagcagcagctgctgctgcttctacaccgagtgccgctagagaggttggtgtgatgcac
gcagacccctcgtcaggcattgttgctgtcgttgccaatgacgacggtccccccagcaac
tctgagaactcgtcctcgtcatcactggctggcccagagctgtcggaggaggaggatgag
gaggatgagggggagcaggcggaggtggaagtcgaggggctctcccgcaggcagcgaggg
gtccgacggcggcagtcggccttcatgctggacctggtcaacgaagactcggactcgagc
ggcttctggttcaacccggtaccgcggccccgctcgcccagccccccgctggaccgctcc
agcctctccagccaatcgcgctcggcctcagagtcagactcctcttcctcctcgtcgagc
ccttcgtcctcctccagcagcgagggcgaggaggaggaggagcagcagcagcggcgctca
aacacgcggcagtgcaacgcagcgaggaggagggtccgcagtcgcatgcacctgcccagc
cgcgacgcagaggaccggccggcgactgcgcaggacctttgttccacgcttgacccctgc
agctaccccaagatcaccattgaagacgccagctcctcttcctcatcctcaggcgggacg
ggttgcgccaacaccgaaaagaagccccggggacgcaagagccggcgccaccaccgtctc
cgcgacgacgacagcccagtccagacgccgggtaaccgtccagagacgaggctcggtgga
cgggtgtcatccaggagcccctcccctacggacagcgacctacggtgtgtgtcgcgagca
ggagagagggatgacaagaaacgagagagcgagggtggaaagagagaaagagcaggtaag
aaggatttcactacatctcacgtggactttttgggctcacaagaacccacaaggaattcc
gaggatccccatcagaatcttcccggaatttctggcacagcagaagagctagacgatgac
ccaacagactctaagacccgggaagcaaccggaacatcgagggtgagcaaacggactcgc
cagggttcagaacttcgccctgagggatcatcactagggtcagcagaggggtcagatgag
ggggcaccctcagaaaagaagctgaagacataa
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