Clupea harengus (Atlantic herring): 105890989
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Entry
105890989 CDS
T09045
Symbol
srsf5a
Name
(RefSeq) serine and arginine rich splicing factor 5a
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03040
Spliceosome
char05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105890989 (srsf5a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
105890989 (srsf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105890989 (srsf5a)
Spliceosome [BR:
char03041
]
Common components
Common spliceosomal components
SR proteins
105890989 (srsf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
105890989
NCBI-ProteinID:
XP_031436299
Ensembl:
ENSCHAG00000007338
UniProt:
A0A6P8GAD5
LinkDB
All DBs
Position
14:9580142..9587338
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AA seq
317 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGEGGGGGGGGGGRGGGPGMGGGGGGGGRFSPRFGGYRQSRS
GGSRYGPPVRTEHRVVVENLSSRISWQDLKDVMRKVGEVTFVDAHRPKQNEGVVEFASHS
DMKNALDKLNGTELNGRKLKLFEDRKRNRSRSSSRSRSYSRSRSRSRSRSKSQSRSRSRN
RSNRSRSRSRSVSRSPDKKPSVSRNDPPRPRSVSRPRSVSRSRSRSRSVSPPPVRKQSRS
RSRSRSRSRSASVESQH
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagcggatgtcgagtgttcatcggtcgcctcagcccccacgcccgtgaaagagacgtg
gagaagtttttcaaggggtacgggaggatacgagagatcaacctaaagaatggatttggg
tttgtggaatttgacgaccacagggatgcagatgatgccgtttacgagctgaacggcaaa
gagctgtgcagcgagagggtcaccatcgagcatgcccgttctcgccgtggaagaggaggt
gaaggcggaggaggaggaggaggtggaggaggacgaggtggtggtccaggaatggggggt
ggtggtggtggtggaggacgattctccccacgctttggaggctatcgccagtctcgcagt
ggaggttccaggtatggtccacctgttcgcacggagcacagagtcgtcgtggagaacctc
tcctctcggatcagctggcaggacctgaaggatgtgatgagaaaggtgggggaggtgaca
tttgtggacgcccacaggcccaaacagaacgaaggtgtggttgagtttgcctctcacagc
gacatgaagaacgcccttgacaagctcaatggaaccgaactgaacggacgcaagctcaag
ctcttcgaggatcgcaagaggaaccgtagcaggagcagctctcgctcccgtagctactcc
cggtcccgttccaggtcccgctctcgctccaagtcccagagccgcagccgcagcaggaac
cgttccaaccgctcccgcagccgttctcgttcggttagccgctccccagacaagaagccg
tccgtcagccggaatgaccccccacgcccacgctcagtgtcccgcccacgctcagtgtcc
cgctcacggtccaggtcccgctctgtgtctccaccccccgtgcgcaagcagtcccgctct
cgctctcgctccagatcccgctctcgctctgcctctgtggagagccagcactga
DBGET
integrated database retrieval system
