Clupea harengus (Atlantic herring): 105891000
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Entry
105891000 CDS
T09045
Symbol
wdr45
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 4
KO
K22991
WD repeat-containing protein 45
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105891000 (wdr45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105891000 (wdr45)
Membrane trafficking [BR:
char04131
]
Autophagy
Other autophagy associated proteins
Others
105891000 (wdr45)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_IFT122_1st
BCAS3_WD40
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR3_2nd
Beta-prop_IFT80_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
105891000
NCBI-ProteinID:
XP_012672594
Ensembl:
ENSCHAG00000021622
UniProt:
A0A6P3VIH7
LinkDB
All DBs
Position
12:4070029..4074359
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AA seq
358 aa
AA seq
DB search
MSQQRGVNSLQFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSVALCSMLHRSNL
LAVVGGGVNPKFSEISVLIWDDARDSRDSKDKLVLEFTFTKPVLAVRMRHDKIIIVLKNK
IYVYSFPDNPVKLFEFDTRDNPKGLCDLCPSLEKQLLVFPGHKCGSLQLVDLSNTKPGTS
SAPFTINAHQSEIACLALNQPGSVAASASRKGTLIRLFDTTTRDKLVELRRGTDPATLYC
INFSHDSSFLCASSDKGTVHIFALKDTKLNRRSALARVGKVGPVIGQYVDSQWSLASFTV
PAECACICAFGKNTSKNVNSVIAICVDGTFHKYVFTPDGNCNREAFDVYLDICDDDDF
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcaaagaggagtgaacagtcttcagtttaatcaagatcagagttgtttctgt
tgtgcaatggagactggtgttcgcatttacaatgtggagccccttatggaaaaaggacat
cttgatcacgaacaggttggaagcgtggctctttgctccatgcttcatcgctcaaactta
ctggctgttgttggaggaggtgtcaaccctaaattttcagagatctcagtgttgatctgg
gacgacgcacgggattcaagagattccaaggacaagttggttttggaattcactttcaca
aagcctgtgctagctgtccgcatgagacatgacaagatcatcattgtcttgaaaaacaaa
atctatgtgtacagtttccctgacaaccctgtgaagttgtttgaatttgacaccagagat
aatccaaaaggtttgtgtgacctatgccctagccttgaaaagcagttgctggttttccct
ggacacaagtgtggaagtttacagctagtggatctatccaataccaaaccaggaacatcc
tctgcaccttttaccatcaatgcccaccagagtgagattgcctgcttggcacttaatcag
cctggcagcgtggctgcgtctgcctcccgtaagggcactctgatccgcctcttcgacacc
accacccgggacaagctagtagaactacgaagagggacagaccctgccacactctattgc
atcaacttcagtcatgattcttcgttcctctgtgcctccagtgacaagggaactgtgcac
atttttgctcttaaagacacaaaactcaaccgccggtctgcgcttgcgcgtgtgggtaag
gttggccctgtgattggtcagtatgttgacagccagtggtctctagccagcttcactgtg
ccagctgaatgtgcctgcatctgtgcttttgggaagaacacgtccaagaatgtgaactct
gtgattgcgatatgtgtcgatgggacattccacaagtatgtcttcaccccggatggaaac
tgtaatcgggaagcttttgatgtttaccttgacatctgtgatgacgatgacttctga
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