Clupea harengus (Atlantic herring): 105891009
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Entry
105891009 CDS
T09045
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-8
KO
K06584
integrin alpha 8
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04510
Focal adhesion
char04512
ECM-receptor interaction
char04514
Cell adhesion molecules
char04810
Regulation of actin cytoskeleton
char04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105891009
04514 Cell adhesion molecules
105891009
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105891009
09142 Cell motility
04820 Cytoskeleton in muscle cells
105891009
04810 Regulation of actin cytoskeleton
105891009
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105891009
Cell adhesion molecules [BR:
char04515
]
Integrins
Integrin alpha subunits
105891009
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GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Lipocalin_7
Integrin_A_Ig_2
Motif
Other DBs
NCBI-GeneID:
105891009
NCBI-ProteinID:
XP_031431875
UniProt:
A0A6P8G9Q6
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Position
11:1936656..1985496
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AA seq
540 aa
AA seq
DB search
MVKTNGERQNLDFKSHQWFGATVRTHGGKVVACAPLYHWRTVRELGEMEPVGTCYVAIQN
FSAFAEYSPCRNTNSDPEGQGFCQAGFSVDFTKDGALVLGGPGSFYWQGQVITVGVAEIL
NGYSRKGILRNVLGEKQTGGAQDTYDDSYMGYSVAVGEFTGESEQELVTGVPRGAQNFGY
VAIINASDLSLIHNFTGEQMASYFGYTVAVTDVNGDGLDDVLVGAPLFMEREQESNPREV
GRVYIYLQTHPLQFAPPTLLTGTHLFGRFASAIAPLGDVNQDGYQDVAVGAPFGGAERDG
CVFIFNGXSEGLRREASQVLSGSWGSPAGPPGFGFTLRGGGDIDSNQYPDLIVGAFGVDK
TVVYRARPVVSVEAQLILTPRVLNPDERTCHLPDSDTMATCIRVDVCMQLSGLGIPETVV
VQAELQLDWLKQRGGVKRVLFMDSKHHQQNQVIKLGQQDQYHCYNYTVFLREEEEFRDKL
TPISVALNYSLDQSSAYPGLELRPILDHYSKTFHQEQANILLDCGEDNMCIPDLKLSAVM
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagacgaacggcgagcgacagaatctggactttaagtcccatcagtggttcggg
gccacggtgcgcacccacggaggcaaggtggtggcgtgtgctcctctgtatcactggcgc
actgtaagggagttaggggagatggagccggtggggacctgctacgtggccatacagaac
ttcagcgccttcgccgagtactctccctgcagaaataccaattcagacccagagggacag
ggcttctgccaggctgggtttagtgtggacttcaccaaggatggtgctttggtgttgggc
ggtcctggcagtttctactggcaaggtcaggtcatcaccgtaggtgtggcagagattctg
aacggatactctcggaaggggatcctgaggaacgtactgggggagaaacagacaggcggc
gcccaagacacctatgatgacagctacatgggatattcagtggcagtcggggagttcaca
ggggaatcagagcaagaactggttactggtgtaccaaggggagctcagaattttggatat
gtggccatcataaacgcctcagatttaagccttatacataatttcactggagagcagatg
gcttcctattttggctacactgtggcagtgactgatgtcaacggtgatgggctggatgat
gtgttggtgggcgctcccctgttcatggagcgtgagcaggagtccaacccccgtgaagtg
gggcgggtctacatctacctgcagacacaccccctccagttcgccccgcccaccctgctc
acgggcacacacctgttcggacgcttcgccagcgccatcgccccactgggagacgtcaac
caggacgggtaccaggacgtggcagtaggcgctccgttcggtggtgcggagcgtgacggg
tgtgtgttcatctttaacgggnggtctgagggcctgcgccgtgaggcctcccaggtgctg
agcggctcctggggctcgcctgccggcccgcctggcttcggcttcacgctgcgcgggggc
ggcgacatcgacagcaaccagtacccagaccttattgtcggggcctttggtgttgacaaa
actgtagtgtacagggcgaggcctgtggtgagtgtggaggcccagctcatcctcactcca
agagttctcaacccggacgagaggacatgccatctgcctgactcggataccatggcaacc
tgcataagggtggatgtgtgtatgcagctctcaggactgggtatcccagagacagtagtg
gtgcaggctgagctgcagttggactggttgaagcagagaggaggtgtgaagagggttctc
ttcatggactccaaacatcaccagcagaaccaggtcatcaaactgggccagcaagaccag
taccactgctacaactacaccgtcttcctgcgggaggaggaggagtttcgagataaattg
acgcccatcagcgtggctctgaactacagtcttgaccaaagctccgcctaccccggcttg
gagctccgccccattctggaccactacagcaagaccttccaccaggagcaggctaacatt
ctgctggactgtggagaggacaacatgtgcatcccagacctcaagctttctgccgtgatg
taa
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