Clupea harengus (Atlantic herring): 105891039
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Entry
105891039 CDS
T09045
Symbol
pnpla6
Name
(RefSeq) patatin-like phospholipase domain-containing protein 6 isoform X1
KO
K14676
lysophospholipid hydrolase [EC:
3.1.1.5
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
105891039 (pnpla6)
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.5 lysophospholipase
105891039 (pnpla6)
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GFIT
Motif
Pfam:
NTE_Ploop
cNMP_binding
Patatin
LapA_dom
Podoplanin
MscL
Motif
Other DBs
NCBI-GeneID:
105891039
NCBI-ProteinID:
XP_031418475
Ensembl:
ENSCHAG00000012074
UniProt:
A0A6P8F2T3
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Position
24:5352116..5392532
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AA seq
1382 aa
AA seq
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MGQSTSGQESPDPPERMLLTDRFTCPDPNPLEDSFDLTQQDGFGNLKTFVEDQLQTSMML
GIVIGAGIAIVLIAILIFFVMRRIQLRNLESQEAPKYRFRKRDKVMFYGRKIMRKVSQST
SSLVGTASSSRPRLKKKQKMLNIAKKILRFKKEVPILQLKEPPPSVLEADLTEFDVANSH
LPSEVLYMLKNVRVLGHFEKPLFLELCKHMVFLQFQQGEYVFRPGQPDSSIYVVQDGKLE
LCLTGQDGKDGVVKEVYPGDSVHSLLSILDVITGHQKPYRTVSARAAEVSTVLRLPVEAF
LSIFEKYPESLVRVVQIIMVRLQRVTVMALHNYLGLTNELFSHEMQPLRLLPPSPHPSRT
SPVRHGKRFGSLTVTEEQREAAVREATGGEQGKDGSTVPTLSRAISMPVDIAGIQKGLRS
DFDMAYERGRISVSAEDGNTPPTFSRSVSQDQRERKVTVDEAPSGVYLYPEEEGFESVYG
ASPSGRHNPALFEEAQKEILKLMKIEDPALLNGRVTLHHAKAGAVLARQGDQDVSLHFIL
SGCLHAYQRMIDKQEAVCLFVTQPGEMVGQLAVLTGEPLIFTIKALRDCTYLKISKSDFY
EIMREQPSVVLSAAHTVAVRMSSFVRQMDFAIDWMAVEAGRALYRQDDQSDCTYIVLNGR
LRSVIRKANGKKELVGEYGRGDLIGVVEALTRQPRATTVHAVRDTELVKLPEGTLNNIKR
RYPQVVTRLIHLLGQKILGNLQQTRGPFSSSALGLPSLGSSPDVTNPASNLSTVAVLPVC
DDVPINAFNLELSHALSAIGPTLMLTSEIIRERLGASALDSIHEYRLSGWLAQQEDINRI
VLYQTDSTMTPWTQRCIRQADCILIVGLGDQEPALGQLEQMLENTAVRALKQLVLLHRED
GPGPSRTVEWLNMRSWCSGHLHLRCPRRVFSRRSPSRLREVYEKVFEKTADRHSDFSRLA
RVLTGNSIALVLGGGGARGCSHVGVIKAMEEAGIPIDIVGGTSIGSFIGALYAEERSAVR
VKQRAREWSKAMNSVFKTVLDLTYPITSMFSGAAFNTSISNVFEDKQIEDLWLPYFNVTT
DITASSMRVHQDGSLWRYVRASMTLSGYLPPLCDPKDGNLLMDGGYINNLPADIARTLGA
KTVIAIDVGSQDETDLCNYGDSLSGFWLLWKRLNPWAEKVKVPDMAEIQSRLAYVSCVRQ
LELVKKSAYCEYIRPPIDRFKTMDFGKFDEIHDVGFQHGKLLFTGWARGDIIDNMLKDYR
SADYNDSKKTDSCTCPGADFTDLAEIVSRIEPVQTFVAADAEESDCLTEYEEDGMDTVRE
EEGEGEGEEEEDDGDDPDDHSPGEWGQNGVFQADVSQDEEKSVRQRRKTPGDSNTCSEVS
DC
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atgggacagagcacttcgggacaagagtccccggatccaccagagcggatgctgttaact
gaccgttttacatgccctgacccaaaccccttggaagattcatttgatcttacccagcag
gacggctttggcaacctcaagacttttgtggaggaccaactgcagaccagcatgatgttg
ggcattgtgattggcgcaggcatcgccattgttcttattgccatcctgatcttcttcgtg
atgcgcaggatacagcttcgaaatttagaatcccaggaagctcccaaataccgtttccgg
aaaagggacaaagtcatgttctatggacgtaagatcatgcgcaaagtgtcccagtctacc
tcgtctctggtggggacggcgtcctcctctcgtccccgtctcaagaagaaacagaagatg
ctcaacattgccaaaaagatcctgcgctttaagaaggaggtgcccattcttcagttaaag
gagcctcctccctccgtgctggaggccgacctcacggagtttgacgtggccaactcacac
ctcccttcagaggtgctctatatgctcaaaaacgtccgggtcctgggccactttgagaag
cccctgttcctggagctgtgcaagcacatggtgttcctgcagttccagcagggcgagtac
gtcttcaggcccggccagcccgacagcagcatctacgtggtgcaggacggcaagctggag
ctgtgccttaccggacaggatggaaaagatggtgtggtgaaggaggtctatcctggagac
agcgtgcatagtttgctcagtatcctggacgtcatcaccggccaccaaaagccataccgc
acagtgtcagcgcgggcggccgaggtctctaccgtgctacggctgcctgtagaagccttc
ctgtccatctttgagaaataccccgagagcttggtgcgcgtcgtgcagatcattatggtt
cgcctccagagagtgacagtgatggctctgcacaactacctgggcctcactaatgagctc
tttagccatgagatgcagcccctgcgcctgctgcctccctctccgcaccccagccgcacc
agccccgtgcggcacggaaaacgcttcggcagcctcacggtcaccgaggaacagcgcgag
gccgccgtcagggaggccacaggaggtgagcaggggaaagacggatctacagtgccaaca
ctcagtcgtgcaatttccatgcctgtggacatagctggcattcagaagggcctgcggtct
gactttgacatggcatacgagcgtggccgcatctctgtgtcggcagaggacggtaatacc
ccacccaccttctcacggtctgtgtcacaggaccagagggagaggaaggtgacggtggac
gaggcgccgtctggagtctacctctaccccgaggaggagggcttcgagagcgtctacggc
gcgtcgccgtcggggcgacacaaccctgccctgttcgaggaggcccagaaggagatcctc
aaactcatgaagatcgaggaccctgcgttgttgaatgggagggtgacgctgcaccatgcc
aaagcaggggccgtcctggccagacagggagatcaggacgtgagtctgcacttcatattg
tcggggtgcctgcacgcgtaccagcggatgatcgacaagcaggaggccgtgtgtttgttc
gtgacccagccgggcgagatggtgggccagctggccgtgctcaccggcgagccgctcatc
ttcaccatcaaggccttgcgcgactgcacctacctcaagatctccaaatccgacttctac
gagatcatgagggagcagcccagcgtggtgctgagcgccgcccacacggtggccgtccgc
atgtcgtccttcgtgcgccagatggacttcgccatcgactggatggccgtggaggctggc
cgcgctctctacagacaagacgatcagtcagactgcacctacatcgtcctgaacggccgt
ctgcgttcggtcatccgcaaggccaacggcaagaaggagttggtcggggagtatggtcgc
ggtgacctcatcggcgtggtggaggcactgaccaggcagccgcgcgccaccacggtccac
gccgtgcgagacacagagctggtgaagctacccgagggcacgctcaacaacatcaagaga
cgctaccctcaggtagtgactcgactgattcacctgttgggccagaagattctggggaac
cttcagcagacgcggggccctttctcaagttctgcgttgggcttaccctccctgggttcc
agccctgacgtcaccaaccccgccagtaacctctccactgtggccgtcctgcccgtgtgc
gacgatgtgccaatcaatgccttcaacctggagctaagccacgccctcagtgccatagga
cccaccctgatgctgacgagtgaaattatcagggagcgactcggagcatcagccctcgac
agtatccatgagtatcggttgtctggctggctggcccagcaggaggacatcaaccggatc
gtgctctaccagacggacagcaccatgacgccctggacccagcgctgcatccggcaggcc
gactgcatcctcatcgtgggcctgggggaccaggagcccgccctcggccagctggagcag
atgctggagaacacagccgttcgggccctgaagcagctggttctgctgcaccgcgaggac
ggacccggaccctccagaaccgtggagtggctcaacatgcgcagctggtgctcgggtcac
ctgcacctccggtgcccacgcagggtcttctcccgacggagtccatcccgactgagagag
gtgtatgagaaggtgtttgagaagacagcagaccgccacagtgacttctcccgcctggcg
cgagtcctgactgggaacagcatagcactggtgctaggaggagggggagccagagggtgc
tcacatgtgggcgtgatcaaggccatggaggaggcgggcatccccatcgacatcgtgggc
ggcacttccatcggctcgttcatcggtgccttgtatgcggaggaacgcagcgccgtgcgc
gtcaaacagcgagcacgggagtggtccaaggcaatgaactccgtgttcaaaacggtcctt
gatctgacctatcccatcacctccatgttctcaggcgccgccttcaacaccagcatctcc
aacgtgtttgaggacaagcagattgaggacctgtggctgccctacttcaacgtgaccact
gacatcacggcctcgtccatgcgggtccaccaggacggctctctgtggcgctatgtgcgg
gcgagcatgaccctctcggggtacctgccgcccctctgcgaccccaaagatggcaacttg
ctcatggacggtggctacatcaacaacctcccagccgacatcgctaggacgctcggcgcc
aagaccgtcattgccatcgacgtgggcagccaagatgaaaccgacctctgcaactacggt
gacagcctctcgggcttctggttgctgtggaaacgactcaacccctgggcggaaaaagtc
aaggtccccgacatggcggagatccagtcgaggctggcgtacgtgtcgtgcgtgcggcag
ctcgagctggtgaagaagagcgcgtactgcgagtacatccggccgcccatcgaccgcttc
aagaccatggactttggcaagtttgacgagatccacgatgttgggtttcagcatggtaag
ctgctcttcacgggttgggctaggggcgacatcattgacaacatgctgaaagactaccgg
tcggccgactacaacgacagcaagaagaccgactcctgcacgtgcccgggagcggacttc
accgacctggccgagatcgtgtctcggattgagccagtccagacctttgtagctgctgat
gcagaggagtccgattgcctgactgagtacgaggaggacggcatggacacggtgcgggag
gaagagggcgagggcgaaggcgaggaagaggaggatgacggcgacgacccggatgaccac
tcccccggcgagtggggccagaacggagtcttccaggcagatgtgtcccaggacgaggag
aagtccgtccgccagcgccggaaaacccctggcgattccaacacctgctccgaggtttca
gactgctga
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