Clupea harengus (Atlantic herring): 105891046
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Entry
105891046 CDS
T09045
Symbol
poll
Name
(RefSeq) DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03410
Base excision repair
char03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105891046 (poll)
03450 Non-homologous end-joining
105891046 (poll)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
char03400
]
105891046 (poll)
Enzymes [BR:
char01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
105891046 (poll)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
105891046 (poll)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
105891046 (poll)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
BRCT
BRCT_2
PTCB-BRCT
NTP_transf_2
Cdd1
LIG3_BRCT
DUF7102
Motif
Other DBs
NCBI-GeneID:
105891046
NCBI-ProteinID:
XP_012672638
Ensembl:
ENSCHAG00000013920
UniProt:
A0A6P3VIJ5
LinkDB
All DBs
Position
24:4043677..4050503
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AA seq
613 aa
AA seq
DB search
MSYQVSLSDEVPSVTRKYFVQTEIGKQDFVLVVGQFWVCLSGMEAHGILKAFPKVKRSKV
AETKDAPPRKKTSDENVTGTVFQDVSVHILPSGIGKARCEIFQRQITQNGGKIEDALGPS
VTHVIVEDTMDCERALRLLKVDTLPSLVKLVKCSWLSACISEKRLLDTTAHGLLLPDRNI
PVSKDKTKEETSEIKPIKGGVTQKCDFQSVHKNPAETMAQTQTQEGKDNYRDEDGVSQSD
LEALISGHHPTEGPSSPATAATTTTTAATQQPSLPGKWVCAQSSVSKGNNHNKHLTDKLE
PLAKAYTHKGDRWRALGYSKAVNALKSYHKPVTSYEEACQIPGIGHRMADKIMEIMESGH
LRKLDHMGEDVPVLELFSNIWGVGAKTAHLWYQLGFRTLEDIRTKATLNHTQQIGLKHYD
DFLDRMPRDEASAIEKTVRDAAHAVDPGLEVVACGSYRRGKATCGDVDVLITHPDGQSHK
GVFSQLLHILHQSCFLTDDLVSNEDNGEQKKYMGVCRLPGSGWRHRRLDVIVVPYAEFAC
AALYFTGSAHFNRSMRALAKTKRMSLSEHSLNCNVVRHGTAKVGSGTPLPTLGEKDVFIH
LGVPYREPHERDW
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaagttagcttgtctgatgaggttccaagtgtgacccggaagtatttcgtt
caaactgaaataggcaaacaggattttgttttggtcgtgggtcagttttgggtatgtctc
agcggaatggaggcccacggtattttaaaagcttttccaaaagtgaagcgatcaaaggtc
gccgagaccaaggacgcacctccacgcaagaagacgtcggacgaaaatgtaacaggcact
gtgttccaagatgtctcagtacacatccttccatctggcatcgggaaagccagatgtgag
atcttccagagacagatcacccagaatgggggaaagattgaggatgcattaggccccagt
gtcacccatgtcatagtggaggacaccatggactgtgagcgggccttgaggctgctgaaa
gtagacaccttgccttccttagtgaagctggtgaagtgttcttggcttagcgcatgcatc
tctgaaaaacggttactggacactacagcccacggtctccttctcccagacaggaacata
ccagtcagtaaagacaagacaaaagaagagacaagtgaaattaaacctatcaaaggcgga
gtgactcaaaagtgtgatttccaatcagtgcacaaaaacccggccgaaacgatggcgcaa
acacagacccaggagggcaaagacaactacagggatgaggacggtgtgtcccagagtgac
ctggaggcactgatcagtgggcaccaccctacagagggtccctcgagcccagctaccgcc
gccaccaccaccaccactgctgccacacagcagccaagcctgcctgggaagtgggtttgc
gcccagtcgtccgtgagcaaggggaacaaccacaacaagcacctgacagacaagctggag
cctctggccaaagcctacacacacaagggggacaggtggcgggccttgggttactccaaa
gccgtcaacgccctgaagagttaccacaagccagtcacgtcttatgaggaggcatgtcag
atcccaggcatcggccaccgaatggccgacaagatcatggagatcatggagagcgggcac
ctccgcaagctggatcacatgggggaggacgtgcctgtgctggagctcttctcaaacatc
tggggagtgggagccaaaactgcacatctgtggtaccagttggggtttcgcaccttggaa
gatatccgcaccaaagcaactttaaatcacacgcagcaaattggactgaaacactacgac
gactttctggatcgaatgccacgagacgaagcatctgccatcgagaagaccgtgagggat
gccgctcacgctgtagacccaggcctggaggtggtggcctgtggctcctaccgtcgaggg
aaggccacgtgcggtgacgtggacgtcctcatcactcacccggacggacagtcccacaag
ggcgtcttcagccaactgctgcacatcctgcaccagagctgctttcttacggacgacctg
gtgagtaacgaggacaatggcgagcagaagaagtacatgggcgtgtgccggctacctggc
tccggctggcgccaccgccgcctggacgtgatcgtggtgccctacgccgagtttgcctgc
gccgcactctatttcaccggctcggcccacttcaaccgctccatgagggccctggccaag
accaagcgcatgagcctatccgagcactcgctgaactgcaacgtggtgcggcacggcact
gccaaggtgggctcaggcactccgctacccacgctcggcgagaaggatgtcttcatccac
ctgggtgttccatacagggaaccccatgagagggactggtga
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integrated database retrieval system