KEGG   Clupea harengus (Atlantic herring): 105891046
Entry
105891046         CDS       T09045                                 
Symbol
poll
Name
(RefSeq) DNA polymerase lambda
  KO
K03512  DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03410  Base excision repair
char03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    105891046 (poll)
   03450 Non-homologous end-joining
    105891046 (poll)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:char03400]
    105891046 (poll)
Enzymes [BR:char01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     105891046 (poll)
DNA repair and recombination proteins [BR:char03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     105891046 (poll)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     105891046 (poll)
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_lambd_f DNA_pol_B_thumb HHH_8 BRCT BRCT_2 PTCB-BRCT NTP_transf_2 Cdd1 LIG3_BRCT DUF7102
Other DBs
NCBI-GeneID: 105891046
NCBI-ProteinID: XP_012672638
Ensembl: ENSCHAG00000013920
UniProt: A0A6P3VIJ5
LinkDB
Position
24:4043677..4050503
AA seq 613 aa
MSYQVSLSDEVPSVTRKYFVQTEIGKQDFVLVVGQFWVCLSGMEAHGILKAFPKVKRSKV
AETKDAPPRKKTSDENVTGTVFQDVSVHILPSGIGKARCEIFQRQITQNGGKIEDALGPS
VTHVIVEDTMDCERALRLLKVDTLPSLVKLVKCSWLSACISEKRLLDTTAHGLLLPDRNI
PVSKDKTKEETSEIKPIKGGVTQKCDFQSVHKNPAETMAQTQTQEGKDNYRDEDGVSQSD
LEALISGHHPTEGPSSPATAATTTTTAATQQPSLPGKWVCAQSSVSKGNNHNKHLTDKLE
PLAKAYTHKGDRWRALGYSKAVNALKSYHKPVTSYEEACQIPGIGHRMADKIMEIMESGH
LRKLDHMGEDVPVLELFSNIWGVGAKTAHLWYQLGFRTLEDIRTKATLNHTQQIGLKHYD
DFLDRMPRDEASAIEKTVRDAAHAVDPGLEVVACGSYRRGKATCGDVDVLITHPDGQSHK
GVFSQLLHILHQSCFLTDDLVSNEDNGEQKKYMGVCRLPGSGWRHRRLDVIVVPYAEFAC
AALYFTGSAHFNRSMRALAKTKRMSLSEHSLNCNVVRHGTAKVGSGTPLPTLGEKDVFIH
LGVPYREPHERDW
NT seq 1842 nt   +upstreamnt  +downstreamnt
atgagctatcaagttagcttgtctgatgaggttccaagtgtgacccggaagtatttcgtt
caaactgaaataggcaaacaggattttgttttggtcgtgggtcagttttgggtatgtctc
agcggaatggaggcccacggtattttaaaagcttttccaaaagtgaagcgatcaaaggtc
gccgagaccaaggacgcacctccacgcaagaagacgtcggacgaaaatgtaacaggcact
gtgttccaagatgtctcagtacacatccttccatctggcatcgggaaagccagatgtgag
atcttccagagacagatcacccagaatgggggaaagattgaggatgcattaggccccagt
gtcacccatgtcatagtggaggacaccatggactgtgagcgggccttgaggctgctgaaa
gtagacaccttgccttccttagtgaagctggtgaagtgttcttggcttagcgcatgcatc
tctgaaaaacggttactggacactacagcccacggtctccttctcccagacaggaacata
ccagtcagtaaagacaagacaaaagaagagacaagtgaaattaaacctatcaaaggcgga
gtgactcaaaagtgtgatttccaatcagtgcacaaaaacccggccgaaacgatggcgcaa
acacagacccaggagggcaaagacaactacagggatgaggacggtgtgtcccagagtgac
ctggaggcactgatcagtgggcaccaccctacagagggtccctcgagcccagctaccgcc
gccaccaccaccaccactgctgccacacagcagccaagcctgcctgggaagtgggtttgc
gcccagtcgtccgtgagcaaggggaacaaccacaacaagcacctgacagacaagctggag
cctctggccaaagcctacacacacaagggggacaggtggcgggccttgggttactccaaa
gccgtcaacgccctgaagagttaccacaagccagtcacgtcttatgaggaggcatgtcag
atcccaggcatcggccaccgaatggccgacaagatcatggagatcatggagagcgggcac
ctccgcaagctggatcacatgggggaggacgtgcctgtgctggagctcttctcaaacatc
tggggagtgggagccaaaactgcacatctgtggtaccagttggggtttcgcaccttggaa
gatatccgcaccaaagcaactttaaatcacacgcagcaaattggactgaaacactacgac
gactttctggatcgaatgccacgagacgaagcatctgccatcgagaagaccgtgagggat
gccgctcacgctgtagacccaggcctggaggtggtggcctgtggctcctaccgtcgaggg
aaggccacgtgcggtgacgtggacgtcctcatcactcacccggacggacagtcccacaag
ggcgtcttcagccaactgctgcacatcctgcaccagagctgctttcttacggacgacctg
gtgagtaacgaggacaatggcgagcagaagaagtacatgggcgtgtgccggctacctggc
tccggctggcgccaccgccgcctggacgtgatcgtggtgccctacgccgagtttgcctgc
gccgcactctatttcaccggctcggcccacttcaaccgctccatgagggccctggccaag
accaagcgcatgagcctatccgagcactcgctgaactgcaacgtggtgcggcacggcact
gccaaggtgggctcaggcactccgctacccacgctcggcgagaaggatgtcttcatccac
ctgggtgttccatacagggaaccccatgagagggactggtga

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