Clupea harengus (Atlantic herring): 105891095 Help Entry 105891095         CDS       T09045                                  Symbol ddb1 Name (RefSeq) DNA damage-binding protein 1   KO K10610   DNA damage-binding protein 1 Organism char  Clupea harengus (Atlantic herring) Pathway char03420   Nucleotide excision repair char04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:char00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     105891095 (ddb1)   09124 Replication and repair    03420 Nucleotide excision repair     105891095 (ddb1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:char04121]     105891095 (ddb1)    03400 DNA repair and recombination proteins [BR:char03400]     105891095 (ddb1) Ubiquitin system [BR:char04121]  Ubiquitin ligases (E3)   Multi subunit type E3    Cul4 complex     Adoptor protein      105891095 (ddb1) DNA repair and recombination proteins [BR:char03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      Cul4-DDB2 complex       105891095 (ddb1)     TCR (transcription coupled repair) factors      Cul4-CSA complex       105891095 (ddb1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd Motif Other DBs NCBI-GeneID:  105891095 NCBI-ProteinID:  XP_031425552 Ensembl:  ENSCHAG00000005762 UniProt:  A0A6P8FQW1 LinkDB All DBs Position 6:complement(29406528..29425534) Genome browser AA seq 1140 aa AA seqDB search MSYNYVVTAQKPTAVNACITGHFTSSEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK IAVMELFRPKGESKDLLFILTAKYNACILEYKQNGESIDIITRAHGNVQDRIGRPSETGI IGIVDPECRMIGLRLYDGLFKVIPLDRDNRELKAFNIRLEELQVIDVHFLYGCQAPTVCF IYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYH NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGGVVLKDL RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNDQGSYVAVMETFTNLGPIV DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDAGRE TDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFFCGNVAHQQLIQITSGSVRLVT QESKSLVSEWKEPQGRNISVAACNSTQVVLAVGRVLYYLQILTGELKQISTTEMEHEVAC LDITPLGESGGESSLCAVGLWTDISARVLKLPCFSPLHKEMLGGEIIPRSILMTTFEGSH YLLCALGDGALFYFGLDLQSGALSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIY SSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLFES PRRICYQEVSQCFGVLSSRVEMQDASGATNPVRPSASTQALSSSVSSSKLFPSSTSPHET SFGDEVEVHSLLVVDQHTFEVLHGHQLLQNEYALSMVSCKLGRDPAVYFIVGTAMVYPEE AEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHLGEFVNVFSHGSLVLQNLGES STPTQGSVLFGTVNGMIGLVTSLSESWYSLLLDLQNRLNKVIKSVGKIEHSFWRSFHTER KTEQATGFIDGDLIESFLDLGRAKMQEVVGGLQIDDGSGMKREATVDEVIKIVEELTRIH NT seq 3423 nt NT seq  +upstreamnt  +downstreamnt atgtcttacaactacgttgtcacagcgcagaaaccaacagcagtaaatgcctgcattact ggccacttcacatcctcggaggatctgaacctactgatcgctaagaacacacgactggag atctatgtggtcactgcggaggggcttcggcccgttaaagaagtgggcatgtatggcaag atcgcggttatggagttgttcaggccaaagggtgagagcaaggatcttctcttcatcctc acggccaaatacaatgcatgcatcttggagtacaaacagaatggagagagcattgacatc atcactcgtgctcatgggaatgttcaggaccgcatcggccgcccctctgagaccggcatc attggcatagtggaccctgagtgcaggatgatcgggctgcggctgtatgatggccttttc aaggtgatcccgctggaccgcgacaaccgcgagctcaaggccttcaacatccgcctggag gagctgcaggtcattgatgttcacttcctgtatggctgccaggcgcccaccgtctgcttc atctaccaggatccacaagggcgccatgtgaagacctacgaagtgtccctgagggagaag gagttcaacaagggcccctggaagcaagagaatgtggaggccgaggcctcgatggtcata ccagtcccagagccatttggtggtgctataatcatcggtcaggagtctattacatatcac aatggagataaatatttggccattgctccccccatcatcaagcaaagcaccattgtgtgt cataaccgcgtggaccccaacggctcgcgctacctgctgggggacatggagggccgactc ttcatgctgctgctggagaaggaggagctgatggacggaggggtggtgctcaaggacctg cgtgtggaactacttggagagacctccatagctgagtgtctcacatacctggacaatgga gttgtctttgtgggctccagacttggagactcccagttggtcaagctaaatgtggacagt aatgaccagggatcctatgtagcggtgatggagacttttaccaatctgggccctattgtg gatatgtgtgtcgtggatctggagagacaagggcagggccagctcgtcacctgttctggc gccttcaaagaaggctccctcaggatcattcgcaatggcattggcatccacgagcacgcc agcatcgacctgccaggaatcaaaggactgtggcccctgcgctccgacgctggcagagag actgatgacatgctggtgctctccttcgtgggtcagaccagagtgctcatgctgagtgga gaggaggtggaggagacggagctcccagggttcgtggacaaccagcagaccttcttctgt gggaacgtggcccatcagcagctaatacagattacgtcgggctccgtgcgcttggtgacc caggagagcaagtctctagtgagcgagtggaaggagccccagggccgcaacatcagcgtg gcggcgtgcaactccacacaggtggtgctggccgtgggcagagtgctgtactacctgcag atcctcaccggggagctcaaacagatcagcaccacagagatggagcacgaggtggcctgc ctggacatcacccctctgggggagagcggcggcgagtcgtccctgtgcgccgtggggctc tggaccgacatctcggcccgcgtgctcaagctgccctgcttcagcccactgcacaaggag atgctggggggagagatcatccctcgctccattttgatgaccacgtttgagggaagtcac tatctgctgtgtgcccttggagatggagccctcttttatttcggtctggacttacaatca ggagctctgagcgagcgcaagaaggtgaccctgggcacccagcccacggttctgcgcacg ttccgctcgctctccacctccaacgtgtttgcctgctccgaccgacccaccgtcatctac tccagcaaccacaagctggtcttctccaacgtcaacctcaaggaggtcaactacatgtgc cccctcaactctgaaggctaccctgacagcctggccttggccaacaacagcactctcacc atcggcaccatcgacgagatccagaagctgcacatccgcacagtgcccctgtttgagtca cccaggaggatctgttaccaggaggtgtcccagtgcttcggggtgctgtccagcagggtg gagatgcaggacgccagcggagccaccaacccagtccgcccgagcgccagcactcaggct ctctccagcagtgtaagctccagtaagctctttccaagcagcacctcacctcatgagacc tcctttggggatgaggttgaagtccacagcctgcttgtagtggaccagcacacctttgaa gttctccacgggcaccagctgctgcagaacgagtacgctctcagcatggtgtcgtgcaag ctgggccgcgaccccgccgtctacttcatcgtcggcacggccatggtctaccccgaggag gccgagcccaagcagggccgcatcatcgtcttccactacaccgacggcaagctccagaca gtcgctgagaaggaggtgaagggagcggtgtactccatggtggagttcaacggcaaactg cttgccagcatcaacagcaccgtgcgtctctacgagtggaccgccgagaaggagctgcgg acggaatgcaaccattacaacaacatcatggctctgtacctgaagaccaaaggagacttc atcctggtgggagacctgatgagatcagtgctgctgctggcctacaagcccatggagggc aactttgaggagatcgcacgggatttcaaccccaactggatgagtgctgtcgagatcctc gatgatgacaacttcctgggggcagagaatgcatttaacctgtttgtttgtcagaaagac agtgctgccaccacagatgaggagcgccaacacctccaggaagtgggcgtgtttcacctg ggcgagttcgtcaacgtgttctcccacggctccctggtgctgcagaacctgggcgagagc tccacgcccacgcaaggctccgtgctgtttggcaccgtcaacggcatgatcggactggtg acatctttgtctgagagctggtacagtctgctgctagatctgcagaacagacttaacaag gtcatcaagagcgtgggcaagattgagcacagcttttggaggtctttccacaccgaacgc aagacggagcaggccacgggcttcatcgacggcgacctgatcgagagcttcctggatctg ggccgagccaagatgcaggaggtggtcggcggtttacagattgacgacgggagtgggatg aaacgtgaggccacagtggatgaggtcattaagatcgtggaggagctcactcgcatccac tag

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