Clupea harengus (Atlantic herring): 105891116
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Entry
105891116 CDS
T09045
Symbol
kars1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
105891116 (kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
char01007
]
105891116 (kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
char03016
]
105891116 (kars1)
Enzymes [BR:
char01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
105891116 (kars1)
Amino acid related enzymes [BR:
char01007
]
Aminoacyl-tRNA synthetase
Class II (A)
105891116 (kars1)
Transfer RNA biogenesis [BR:
char03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
105891116 (kars1)
Prokaryotic type
Other AARSs
105891116 (kars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
105891116
NCBI-ProteinID:
XP_031425591
Ensembl:
ENSCHAG00000012424
UniProt:
A0A6P8FPV7
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All DBs
Position
6:30623907..30631570
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AA seq
608 aa
AA seq
DB search
MLTLVRVAGRQVCQALGVKALMPKLACPNPAAVPALIQGHRWRGDKSELKRRMKADKKAS
EKEAKVKEQLDQKKPNDKPEQNDYGADEETLDPNQYFKIRTQAIQALKGTSEDPYPHKYQ
VDLSLSEFLEKYNHLEPGDQLKDVLSVAGRVHAKRASGAKLLFYDLRGEGVKLQVMANNR
NYKSEEEFVHINNKLRRGDIVGVRGNPGKTKKGELSIIPIEMTLLSPCLHMLPHLHFGLK
DKETRFRQRYLDLILNDPVRQKFVTRAKIITYLRSFLDQLGFLEIETPMMNLIPGGAVAR
PFVTHHNDLDMNLYMRIAPELYHKMLVVGGIDRVYEVGRQFRNEGIDLTHNPEFTTCEFY
MAYADYHDLMDITEKLLSGMVKHITGGYKVTYHPDGPDGQAYEIDFTPPFRRVSMVYDLE
KAMGVKFPPPDTYDSNETRKFFDDLCTQKGVECSAPRTTARLLDKMVGDYLEVTCINPTF
ICDHPQIMSPLAKWHRSQKGLTERFELFVMKKEICNAYTELNDPVRQRELFEQQAMAKAE
GDDESMSIDETFCTALEYGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFPAMKPDDNKPA
PTAEGTSV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgctgacactggtcagagtggccgggcggcaggtgtgccaagcccttggggtcaaggca
ctgatgccaaagcttgcttgccccaatccagcagccgttcctgcgctaattcagggacat
cgctggcgaggtgacaagagtgagctgaaaaggcgcatgaaagctgataagaaggcatca
gagaaagaggccaaggtcaaggagcagcttgaccagaagaagcccaatgacaagcctgag
cagaatgactatggggctgatgaggaaactctggaccccaatcaatacttcaagattcgt
acacaagctatccaagcactgaagggcacgtcggaggatccctacccccataagtatcag
gtggacctgtcactctcagagtttcttgagaagtacaaccacctagagccaggggaccaa
ctaaaggatgtcctcagtgtggcaggtcgtgttcatgctaagagggcatcaggtgccaag
ttgctgttctatgacctacgaggggaaggtgtgaaactgcaagtcatggcaaataacagg
aattacaaatcagaggaagagtttgtgcatatcaataacaagttgagacgaggtgatatt
gttggagttcgtggtaaccctggaaagacaaagaaaggagagcttagcattattcccatt
gagatgacccttctgtccccatgtctacatatgctgccccatctccactttgggctcaag
gacaaggaaacaaggttccgtcagcgatacttggatctgattctgaatgaccctgttagg
caaaagtttgtgacgcgggcaaaaatcatcacttacctgcgtagtttcttggaccagctt
ggctttttggagattgagactcccatgatgaacctcatccctggtggggcagttgcacgg
cctttcgttacccaccacaatgacttggacatgaacctgtacatgagaattgccccagag
ttgtaccataagatgttggtggttggcggtattgatagagtgtatgaggttggccggcag
ttcaggaatgaaggcatcgacctgactcacaacccagagttcactacatgcgaattctac
atggcctatgctgattaccatgacctcatggacatcacagagaagctgctttcaggaatg
gtgaagcacatcactggtggctacaaggtgacctaccatcctgatgggccagatgggcag
gcgtatgagatcgacttcaccccgcccttcagaagggtcagtatggtgtacgacctggag
aaagccatgggtgttaagttccctcccccggacacatatgacagcaatgagactcgtaag
ttcttcgatgacctctgcacccagaagggagtggagtgctctgctcctagaaccacggcc
cgtctcttagacaagatggtgggagactacttggaagtaacatgcatcaatcccactttc
atctgtgaccatccacagatcatgagtccgctggccaagtggcaccgatcgcagaaagga
ctgactgagcgcttcgagctcttcgtcatgaaaaaggagatctgtaatgcgtacacagag
ttgaatgaccccgtcagacagagggaactctttgagcaacaggctatggcaaaggcggag
ggtgacgacgaatccatgtccattgacgagacgttctgcactgctctggagtacggcttg
cctcccacggcaggctggggaatgggcattgaccgagtcaccatgttcctgactgactcc
aacaatataaaggaggtccttctgttccctgccatgaagcctgatgacaataagcctgcc
ccaacagcagagggcacctcagtgtaa
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