Clupea harengus (Atlantic herring): 105891123
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Entry
105891123 CDS
T09045
Symbol
arnt2
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator 2 isoform X1
KO
K15589
aryl hydrocarbon receptor nuclear translocator 2
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105891123 (arnt2)
Transcription factors [BR:
char03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
105891123 (arnt2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS
PAS_11
HLH
PAS_9
PAS_4
Per3-like_PAS-A
PAS_2
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
105891123
NCBI-ProteinID:
XP_031425582
Ensembl:
ENSCHAG00000011050
UniProt:
A0A6P8FR10
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Position
6:complement(30321788..30362462)
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AA seq
739 aa
AA seq
DB search
MATPAAVNPSEMGTDLPGPVAMPGAVVGAGQVRMAGSMPGRGGKRRSGGMDFDDEDGEGP
SKFSRELHTIPAMQDNAPSTQKMENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDK
LTILRMAVSHMKSMRGTGNTSTDGAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIY
VSDSVTPVLNHPQAEWLGSTLYEQVHPDDVDKLREQLSTSENSMTGRILDLKTGTVKKEG
QQSSMRMCMGSRRSFICRMRCGNAPLDHISVNRLSNMRKRYRNGLGPSKEGEGQYSVVHC
TGYIKAWPPAGMTIPDEDGDGGSTSKYCLVAIGRLQVTSSPVSMDMNGLSVPTEFLSRHN
SDGIITFVDPRCINVIGYQPQDLLGKDILEFSHPEDQSHLRESFQQVVKLKGQVLSVMYR
FRMKNREWMLIRTSSFTFQNPYSDEIEYIICTNTNVKQLQQQQQAELEVHQREGLTAYDL
SQVPVPSVPAGVHETGKAIDKTEAMFSQERDPRFADMYSGISGSDKKMMVPSSTAGSQQI
YSQGSPFQPGHSGKSFSSSVIHVPGVNDIQPSASAGQNLAQISRQLNPGQVSWTGNRPPF
SGQQLPAQSSKAQSSPFGIGSSHSYQADPSSYSPLSSPATSSPSGNAYSNLANRSTAFDV
AAEGNQSGGQFQGRPSEVWSQWQSQHHGQQGGEQHPHPQPSQTEVFQDMLPMAGDPTQGT
ANYNIEDFADLGMFPPFSE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacccgccgcggtaaatccatcggaaatgggcacagatctcccagggccggtg
gccatgcctggtgcagtggtgggcgcgggccaggtcaggatggccggatccatgccaggc
agaggaggcaagaggagatctggcggaatggactttgacgatgaggacggagaaggaccc
agcaaattctcaagagaattacacacaataccagcgatgcaagacaatgccccctctact
cagaaaatggaaaaccacagcgagattgagcgccggcgccgcaacaagatgacccagtac
atcacagagctgtcggacatggtgcccacctgcagcgccctggcgcgcaagccagacaag
ctgaccatcctgcgcatggccgtgtcccacatgaagtccatgagggggacggggaacacc
tccaccgatggagcctacaaaccctccttcctcactgagcaggagctgaagcacctgatc
ctggaggccgcggacggcttcctgtttgtggtggcggcggagacaggccgtgtgatctac
gtgtcggactcggtcacgcccgtgctgaaccacccccaggcggagtggctggggagcacg
ctgtacgagcaggtgcaccccgacgacgtggacaagctccgggagcagctcagcacctcg
gagaactccatgaccggtcgtatcctggacctgaagacgggcacggtgaagaaggaaggc
cagcagtcctctatgaggatgtgcatgggctccagacgctccttcatctgcagaatgagg
tgtgggaacgctcctctggatcacatctctgtgaaccgcctgtccaacatgaggaagaga
tacaggaatggcttagggccttctaaagagggtgaagggcagtactctgtggttcactgt
accggctacatcaaagcctggccgccagcaggcatgacgatacctgacgaggacggtgat
ggcggctcaaccagcaagtactgcctggtggcgattggaagacttcaggtcaccagctcg
cccgtctccatggacatgaacggcctgtccgtccccacggagttcctctcccgccacaac
tcagacggcatcatcaccttcgtggacccccgctgcatcaacgtgattgggtaccagcca
caggatctgcttgggaaagatattctggaattctcccacccagaggaccagagccacttg
cgggaaagctttcagcaggtggtgaagctaaaaggccaggtgctgtcggtgatgtaccgc
ttccgcatgaagaaccgtgagtggatgctgatccggaccagcagcttcaccttccagaac
ccctactcggacgagatcgagtacatcatctgcaccaacaccaacgtcaagcagctccag
cagcagcagcaggccgagctggaggtccatcagagggaaggcctgaccgcctacgatctc
tcccaggtgcccgtcccgagtgtgcccgcgggcgtgcacgagaccggaaaggccattgac
aaaaccgaggccatgttctcccaggagagggacccccgcttcgctgacatgtactccggg
atctctggatctgataagaagatgatggtcccatcatccacagcagggagccagcagatc
tactcccagggaagcccctttcagccaggccactctggaaagagcttcagctcgtcggtg
atccacgtgccgggagtcaacgacatccaaccgtctgcgtccgccgggcagaacctagcc
cagatctccagacagctcaatcccggccaggtgtcctggacagggaacagacctcctttc
tcaggccagcaactccctgcacagtctagcaaggcccagtcatctccgtttggcatcggc
tccagccacagctaccaggctgacccgtcctcctacagccctctgtccagcccggccaca
tcctcccccagtggcaatgcctactccaacctggccaatcgcagcacagccttcgatgtg
gcggcagagggcaaccagagtggagggcagttccagggccggccgtcggaggtgtggtcc
cagtggcagagccagcaccacgggcagcaagggggagagcagcacccccacccccagccc
agccagacggaggtgtttcaggatatgttgccaatggccggagatcccacacagggcaca
gccaattacaacattgaagattttgcagacttgggcatgttccctccattttctgagtaa
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integrated database retrieval system
