Clupea harengus (Atlantic herring): 105891129
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Entry
105891129 CDS
T09045
Symbol
il16
Name
(RefSeq) pro-interleukin-16 isoform X1
KO
K22628
interleukin 16
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
105891129 (il16)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
char04052
]
105891129 (il16)
Cytokines and neuropeptides [BR:
char04052
]
Cytokines
Interleukins
105891129 (il16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
105891129
NCBI-ProteinID:
XP_031425579
UniProt:
A0A6P8FI45
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Position
6:complement(30215562..30222351)
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AA seq
906 aa
AA seq
DB search
MTRSCSEGAYSQRCGPAGTGTGTGTAPPQQHPDVVGRVHSMDVSMASATIPRAEVVSSSR
LSPTYSDDDYNVPYNSPATFPCQQPLDVVTGGSRGSKPRPPAPPRRCCRQEDVTSEEPLT
DTSGSSRDSPVKEEDLLPSQNCQETSEHSGGTKAALSGSVQDTCDVIECSNRGESSQGET
GTESPSHICCQKRRVALRRQARVEVTPDQLQDPWVRLSDSPENQPSPTPSTMADHTEPEE
METADTNGVSEPQSASTVPEEVPSGKKGPPVAPKPAWFRKSLNKNRQLPPEQLKPTENKS
PSVSRTFGVNLRSTPSKSSIKQRIHSFETFSSAEGSERSTRRVATPTSLPAVERTACQSS
APVSSDTSTTGGSPTALKSTTDKEEPQPATVTPEVTPDQPSEEPSKDPEPEVTPEQPCEE
PSKDPEPEVTPNQPSEEPSKDPEPEVTPNQPSEEPSKDPEPEVCQTTLDKEPTEETSTSP
SDEATTSEADQETASPAESSASTHCPRRASSSKGTLSDKPPASEGDAPHQASLRTQSLPL
NASPSPEYTGVKGLDGESLGKILSFSNQVSNAFMRSMQSLPQSPCIRPGNPWPTHAALTP
DSEDQEMTDKVPLSPAADNNEKGFSVSLAELRECTMGRGEDGTGEGRAQTTPSSACAQSM
ISAIPQEEVDRMIEEVKALDEETLKQLEEIHVVILHKEEGIGLGFSIAGGIDLENKATTV
HRVFPAGLAAQEGTIEKGDEVLSINGQTLKNVTHNDATATLRQARGLRQAVVVVCKNRDG
TGAASSGAHVSSGNAGLDNSFTADETGDVVTLTMEKNAGGVGFSLEGGKGSIHGDRPLTV
SRVFTGGAAEQRGMQVGDEVLQVADSSLQGLSRFEAWNLVKAVPEGPFTAIIRRKSEEQE
GEKEAE
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgacccgctcctgcagcgagggagcctacagccagcggtgcggcccggcgggcacgggc
acgggcacgggcacggccccgccccagcagcaccctgacgtggtgggccgggtccacagc
atggacgtctctatggcctctgccactattcccagagcggaggtcgtatccagcagcaga
ctgtctcccacgtacagtgacgatgactataatgtgccttacaactcgccagcaaccttc
ccatgtcagcagcctcttgacgtggtcactgggggctccaggggatccaagcccaggcca
ccggcccctcccaggaggtgctgcagacaggaggacgtcaccagtgaggagcctctgaca
gacacaagcggatccagccgggactcgcccgtcaaagaagaggatttgctcccctcacag
aactgtcaggaaacgagtgagcactcagggggaactaaagcagctctcagcggttcagtc
caagacacttgtgatgtgatcgagtgctccaaccgaggagagagctcacaaggagaaaca
ggtactgagtcacccagccacatctgctgccagaaacggagggtggccctgagacgtcag
gcccgtgtggaggtgaccccagatcagctgcaggacccctgggtcaggctttccgacagc
ccagagaaccagcccagccccaccccatccaccatggccgaccatactgagccagaggaa
atggaaacggcagacaccaacggcgtgtctgaaccacagagtgcttcaaccgtgcccgag
gaagtccccagtggcaagaaggggccccctgtggctcccaagcctgcgtggttccgcaaa
agcctgaacaagaacaggcaacttcccccagaacagctgaaacctacagaaaacaagagt
ccaagtgttagcaggacattcggggtcaatttgcggtctactccatcaaaatcgtctatc
aaacagaggatccactcttttgagacgttctccagcgcggaagggtccgagcggagtacc
aggagagtggctacaccaacatcactgccagcagtggagagaactgcgtgccagagcagc
gcccctgtctcttctgacacgagtaccacaggagggagcccaactgctttgaaaagcacc
actgataaagaggagccacagcctgctactgtcaccccagaggtcactcctgatcagccc
tccgaggaaccttcaaaagacccagaaccagaggtcactcctgaacagccctgcgaggaa
ccttcaaaagacccagaaccagaggtcactcctaatcagccctccgaggaaccttcaaaa
gacccagaaccagaggtcactcctaatcagccctccgaggaaccttcaaaagacccagaa
ccagaggtctgccaaaccacactggataaggagcccactgaggagacttccaccagcccc
tccgatgaggcaaccacttccgaggcagatcaggaaacagcctctcctgcagagtcatcc
gcttcgactcactgccccagaagagccagcagctcaaagggcaccctgtctgacaagcca
ccggcgtccgaaggagatgcaccacaccaggccagcctgaggactcaaagcctgcccttg
aatgcctccccgtctccagagtacaccggtgttaagggcctagatggggagagcctgggg
aagatcctgtccttcagtaaccaggtgtccaatgcctttatgcggtctatgcagtccctg
cctcagtcgccctgcatcaggcctggtaatccttggcctactcatgctgcgttgactccc
gactctgaagaccaggaaatgacagacaaggtgcccctatcccctgcagctgacaacaat
gagaagggattctctgtaagcctggcagagctcagagagtgcaccatgggacggggtgaa
gatggcacaggggagggccgggcccagaccacaccctcctccgcctgcgctcagtccatg
atttcagccattccccaggaagaggttgaccggatgattgaagaggtcaaggcactggac
gaggagactctgaaacaactggaggagatccacgtggtgatcttacacaaggaggaagga
ataggtctgggctttagcatcgcgggtggcatagacctggagaacaaagccacgacagtg
catcgcgtgttcccggctggactggccgcgcaggagggcacaatcgagaagggcgacgag
gtgctgtccattaatgggcagacactgaaaaacgtgacccataacgatgccacggccacg
ctcaggcaagcgcgcggcctcaggcaggcggtggtggtggtgtgcaagaacagggatggc
acgggcgcggccagcagcggcgctcacgtctccagcggcaacgcaggcctagacaactcc
ttcacggcggatgaaacaggtgacgttgtgacgctgaccatggagaagaatgcgggggga
gttgggttcagcttggagggaggaaagggctccatccatggagacaggccgctgacggtc
agcagggtcttcacaggtggagctgctgagcagagagggatgcaggttggggatgaggtg
ctgcaggtggcagactcgtccttgcagggcctctcgcgctttgaggcctggaacctcgtg
aaggctgtgccagagggacccttcacagccatcataaggaggaagagcgaagagcaggag
ggagaaaaggaggccgagtga
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