Clupea harengus (Atlantic herring): 105891169
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Entry
105891169 CDS
T09045
Name
(RefSeq) leucine-rich repeat-containing protein 4B-like
KO
K16360
netrin-G3 ligand
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04514
Cell adhesion molecule (CAM) interaction
char04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
105891169
04517 IgSF CAM signaling
105891169
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105891169
Cell adhesion molecules [BR:
char04515
]
Immunoglobulin superfamily
NGL family
105891169
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_14
V-set
LRR_9
Ig_2
LRRNT
LRR_LRWD1
Ig_6
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
105891169
NCBI-ProteinID:
XP_012672777
Ensembl:
ENSCHAG00000009467
UniProt:
A0A6P3VI40
LinkDB
All DBs
Position
23
Genome browser
AA seq
706 aa
AA seq
DB search
MWAAMVTGLSNPTPLLWLVQLLLWPHPSGPQLTAATPPCPTPCSCSNQASRVICTRRGLA
DVPDNISENTRYLNLQENSIKIIKSDTFRHLRHLEILQLSKNHIQQIEVGAFNGLPALTT
LELFDNRLTVVPSGAFEYLSKLRELWLRNNPIETINSNAFARVPSLRRLDLGELRKLVYI
SDMAFDGLENLRFLNLGMCELKDVPKLTALVRLEELELSGNQLGVLRPGSFQGLSALRKL
WLMHSRVTILERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQRLVRVHLNHNPWECSCD
ILWLSWWLKEALPDNSTCCARCHAPPRLKGRYIGDLDQSHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTTMTSVNWLSPNGTLMTHGAYKVRINVLHDGTLNFTNVTMQDAGPYTCMV
TNAAGNTSATALLNVSSAADPTSIYTYFTTVTVETLEVNDSARQYVNESLIPGGTMPGSV
DGRTVYGTVPPNGPSQPPLSPRDKVTEKAFTVSITDVANLSKLEDVMKTTKIIIGCFVAI
TFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELTGGNASGISGGSTLHRNTAGC
VSAGGGVCHEPEIVTLPNIGRADLNHYYKSHTFNNNVMGLSLGSKSSPPSLSPQGKMGQE
CLESKHSPPTLSLHMGLHSSLKAQNSHMEPLLFKNSSKENVQETQI
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtgggctgccatggtgaccggcttgtcaaatcccacccccctcctctggttggtccaa
cttctgttgtggccacaccccagcggacctcagctgacagcagccacgcctccgtgcccc
accccatgcagctgctccaatcaggcgagtcgagtaatctgtaccaggaggggattggct
gatgtgcctgacaatatctcggagaacacgcgatacctcaacctgcaggagaactcaatc
aagataattaagtcagacaccttccgacacctgcgacacctggagatcctgcagctctcc
aagaaccacatccagcagatcgaggtgggcgccttcaacgggctgccggctctcaccacc
ctggagctcttcgacaaccggctcaccgtggtgccgtctggcgctttcgagtacctgagc
aagctgcgcgagctgtggctgcgcaacaaccccatcgagacgatcaactccaacgccttc
gcccgcgtgccctcgctgcggcgcctggacctgggcgagctgcgcaagctggtctacatc
tcggacatggcgttcgacggcctggagaacctgcgcttcctcaacctgggcatgtgcgag
ctgaaggacgtgcccaagctgacggcgctggtgaggctggaggagctggaactttccgga
aaccagcttggcgtgctgcggccggggtcgttccagggcctgtcggcgctgcgcaagctg
tggctcatgcactcgcgcgtgaccatcctcgagcgcaacgccttcgacgacctcaagaac
ctggaggagctcaacctgtcccacaattccctgcactctctgccgcacgacctgttcacg
ccgctgcagcgtctggtgcgcgtgcacctcaaccacaacccgtgggagtgcagctgcgac
atcctgtggctcagctggtggctcaaggaggcgctgcccgacaactccacctgctgcgcc
cgctgccacgcgcctccgcgcctcaaggggcgctacatcggcgacctggaccagagccac
ttcacctgctacgcccccgtcattgtggagccgcccaccgacctgaatgtgacggagggc
atggcggccgagctcaagtgccgcacgggcaccaccatgacgtcggtcaactggctgagc
cccaacggcacgctgatgacgcatggcgcctacaaggtgcgcatcaacgtgctacacgac
ggcacgctcaatttcaccaacgtcaccatgcaggatgccgggccgtacacttgcatggtg
accaacgccgccggcaacacgtcagcgacggcgctgctcaatgtctcgtcggcggccgac
cccaccagcatctacacctacttcaccactgtcaccgtggagacgctggaggtgaacgac
tcggcgcgccagtacgtcaatgagtcacttattcctggcgggactatgccgggttccgtg
gacgggaggacagtctatggcacagtgccccccaatggcccctcgcagcccccactttca
ccgcgagacaaggtgacagaaaaggccttcaccgtgtccatcacggacgtggccaacttg
tcgaagctggaagacgtgatgaagaccaccaagatcatcatcggctgcttcgtggccatc
accttcatggcggccgtcatgctggtagtcttctacaagctgaggaagcagcaccagctg
cacaagcaccacggccccgcccgcgccatcgagatcatcaacgtggaggacgagctcacc
ggcggcaacgccagcggcatctccggcggctccacgctgcaccgcaacacggcgggttgc
gtctccgccggcggcggtgtctgccacgagcccgagatcgtcacgctgcccaacatcggc
cgcgccgacctcaaccactactacaagagccacaccttcaacaacaacgtgatggggctt
agcctgggctccaagagcagcccccccagcttgagcccccaggggaagatgggccaggag
tgtctggagtccaaacacagccccccgaccctgtccctccacatgggcctgcactcctca
ctcaaggcccagaactcgcacatggagccgctactgttcaagaacagctcgaaggagaac
gtgcaggagacgcagatctaa
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