Clupea harengus (Atlantic herring): 105891268 Help Entry 105891268         CDS       T09045                                  Name (RefSeq) zgc:136908   KO K13525   transitional endoplasmic reticulum ATPase Organism char  Clupea harengus (Atlantic herring) Pathway char04137   Mitophagy - animal char04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:char00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     105891268  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     105891268  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:char03019]     105891268    03009 Ribosome biogenesis [BR:char03009]     105891268    04131 Membrane trafficking [BR:char04131]     105891268   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:char04147]     105891268 Messenger RNA biogenesis [BR:char03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Ran-mediated transport factors      105891268 Ribosome biogenesis [BR:char03009]  Eukaryotic type   Pre-60S particles    Ribosome quality control proteins     105891268 Membrane trafficking [BR:char04131]  SNARE   SNARE associated proteins    Others     105891268  Autophagy   Aggrephagy    Other aggrephagy associated proteins     105891268 Exosome [BR:char04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    105891268 SSDB OrthologParalogGFIT Motif Pfam:  AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 AAA_5 CDC48_2 AAA_33 AAA_22 AAA_2 TIP49 AAA_14 RNA_helicase NPHP3_N AAA_28 Vps4_C nSTAND3 AAA_17 Mg_chelatase Parvo_NS1 AAA_18 DUF815 ATPase_2 AAA_7 ABC_tran ATPase IstB_IS21 AAA_24 NB-ARC Sigma54_activat ResIII TsaE nSTAND_NTPase5 Viral_helicase1 NACHT SLFN-g3_helicase Zot Motif Other DBs NCBI-GeneID:  105891268 NCBI-ProteinID:  XP_031418370 Ensembl:  ENSCHAG00000006595 UniProt:  A0A6P8F2X2 LinkDB All DBs Position 24:complement(17236955..17265742) Genome browser AA seq 807 aa AA seqDB search MPATGTTDPKAEDYSTAILKQKTRPYRLIVDEAINEDNSIVSLSQSKMEELQLFRGDTVV LRGRKRRETVCIVLTDDTCATERVRMTRVTRNNLRVRLGDIISIHACPDVKYGKRIHVLP IDDTIEGLTGNLFEVFLKPYFLEAYRPVHMGDIILVRGGMRAVEFKVVETDPASHCIVAP DTIIHCEGEAIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPGLFKAIGVKPP RGILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRVHVVVMAATNRPNSVDPALR RFGRFDREIDISIPDSIGRLEILQIHTKNMKLADDVDLERIGKETHGHVGADMAALCSEA ALQAIRKKLTLIDLEDDTIDADLLNSLAVTMDDFQWALGQSNPSALRETVAEIPQVNWED IGGLDEVKRELQELVQYPVEYPEKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN FVSIKGPELLTMWFGESEANVRDIFDKARQAAPCILFFDEMDSIAKSRGGGAGDAGGAAD RVINQILTEMDGMSNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDVRSRSAILK ANLRKSPIAKEVDLEYLSGTTEGFSGADLTEICQRACKLAIREAIEAEIHAERQRRSRPD TAMDEDSDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPTGSE VGGGQGSGQGNSGNMFRDDGDDDDLYQ NT seq 2424 nt NT seq  +upstreamnt  +downstreamnt atgcctgcaacggggacaacagatccgaaggcggaggattactccacagctattctaaag cagaagactcgaccctacagactcatcgtcgatgaagccatcaatgaggacaacagcatt gttagcctctcccagtcgaagatggaggagttgcagctgttccgcggggacacggtggtg cttcggggacgtaagcggcgggagacggtctgcatcgtcctcaccgacgacacctgcgcc actgaacgcgtgcgcatgacgcgcgtcacccgcaacaacctgcgtgtcaggctgggggat atcattagcatccacgcctgcccggatgtgaagtacggcaagcgcatccacgtgctgccc atagacgacaccatcgagggcctcacggggaacctgtttgaggtcttcctcaagccctac ttcctggaggcctacaggcctgtgcacatgggtgacatcatcctggtgcgtgggggcatg agggcagtagaattcaaggtggtggagacagaccccgcctctcactgcatagttgccccg gataccatcattcactgtgagggggaagcgatcaaaagagaggatgaggaggagagcctg aatgacattggctacgatgacatcggcggctgcaggaagcagctggcccagattaaggag atggtggagctgcctctcaggcaccccggcctcttcaaggccattggagtgaagcccccc agaggcatcctgctctacggccccccaggcacggggaagactctggtggctcgtgctgtt gccaacgagacgggagccttcttcttcctcatcaatggtcctgagatcatgagtaagcta gccggcgaatcagagagcaacctgcgcaaggccttcgaggaggcggagaagaacgccccc gccatcatcttcatcgatgagctggatgccatcgcccccaagagggagaagactcacggg gaggtcgagcgacgaatcgtctctcaactcctcaccctgatggacggcctcaagcaacgt gtccatgtcgttgtcatggcagccacaaacagacccaacagcgtggatccagctctacgc cgctttgggaggtttgatcgtgagattgatatcagcatccctgactccattggccgactg gagatcctacagattcacaccaagaacatgaaactagcagacgacgtggatctggagagg ataggcaaggagacccacggtcacgtaggtgctgacatggcggcgctgtgctccgaggcg gccctgcaggccatccgtaagaagctgaccctcatcgacctcgaggacgacaccatcgat gccgacctgctcaactcgctcgccgtcacaatggacgacttccagtgggccctgggtcag agtaacccctctgcactgagggagacggtggctgagattcctcaggtgaactgggaagac atcggcggcctggacgaggtcaagagggagctgcaggagctcgtgcagtacccggttgag taccctgaaaagttcctgaagttcggcatgactccgtcccgcggtgtgctcttctacggc ccgccgggctgcggtaagaccctgctggcaaaagccatcgccaacgagtgccaggccaac ttcgtctccatcaagggtcccgagctcctcaccatgtggttcggagagtccgaggccaac gtcagagacatcttcgacaaggctcggcaggcagcgccgtgcatcctcttctttgacgag atggactccatcgccaagtccagagggggaggggccggtgatgcggggggcgcggccgac cgtgtcatcaaccagatcctgaccgagatggacggcatgagcaacaagaaaaacgtcttc atcatcggggctaccaacagacctgacatcatagatcctgccatcctgagacctgggcgt ctggatcagctcatctacatccctctgccagacgtgcgctctcgctccgccatcctcaaa gccaacctacgcaagtcacccatcgctaaggaggtggatctagagtatctgtctggcacc acagaggggttctctggggccgacctgacggagatctgccagagagcctgtaagctggcc atcagggaagccatcgaggccgagatccacgcagagagacagaggcgcagccggccagac actgccatggatgaggactctgaccccgtgcctgagatcaggaaggaccactttgaggag gccatgcgcttcgcccgccgctccgtcagtgacaacgacatccgcaagtacgagatgttc gcccagacgctgcagcagagcaggggcttcggaaacttcaggtttcccactggctccgaa gtcgggggaggtcaggggtcaggtcagggtaactccggcaacatgttcagagacgacggg gacgacgacgacctctaccagtga

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