Clupea harengus (Atlantic herring): 105891303
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Entry
105891303 CDS
T09045
Symbol
nhej1
Name
(RefSeq) non-homologous end-joining factor 1
KO
K10980
non-homologous end-joining factor 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
105891303 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
char03400
]
105891303 (nhej1)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
105891303 (nhej1)
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GFIT
Motif
Pfam:
XLF
XLF_CC
Motif
Other DBs
NCBI-GeneID:
105891303
NCBI-ProteinID:
XP_031414449
Ensembl:
ENSCHAG00000001828
UniProt:
A0A6P8ER51
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Position
21:complement(26010938..26025348)
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AA seq
413 aa
AA seq
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MSDVGKGHLQPIVSSAAAAARSSLVKRNDFCGSCLDGGHVRESERSPEREMEDAGLCEVA
VSEQSWVPVLVQGTELLAKAWFGDTRYRVLLSDLHCVWEEEMLAEAIGSRAQELNKRLRA
PVQAFFTHLRCVAEPLLSGQAGDHDGVEVPFSLLRHDDHLTVRLKSELAGVPFHWEFRLT
PASVPVVCRQLVRPLLAMTRVLQRQVEELAGLLGRKDAEIQDYKENGAVLTRGRLLTDVF
DEERYRQNFFSLTLPQVAAVQECVSFSPELQDLYAAVSSQRGGQRRRKRRRSNASADTHT
EDDTHTPAQDQGPEHNTHTQVQDQGPEQHNTHTHDQRPDHNTHTHTDHMHEPGSRSSSDH
GTTPGPGEQKNPGGGSSGEPQKSESEQTVPQMAAPVDRSVSRPKKKKAVGLFR
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgttgggaagggccatttacagcctattgtcagctcagccgctgccgctgcc
aggagcagtttggtgaagcggaacgatttctgtggttcctgtttggacggcggacatgta
cgagagtcggaacggtcccctgaacgtgagatggaggacgctggcctgtgtgaggtggct
gtgtccgagcagtcctgggtcccggtgcttgtgcaaggcactgagctgctggccaaagcc
tggttcggcgatacacggtaccgggtcctgttgagcgatctgcactgtgtgtgggaggag
gagatgcttgcagaggcaataggcagcagagcccaggagcttaataaaaggctgcgcgct
ccagtccaggccttcttcacccacctccgctgcgtggcagagccccttctctccggtcag
gcgggcgaccatgacggtgtggaggtgcccttctcgctcctgcgccatgacgaccacctc
acggtccggctcaagagcgagctggcgggggtgccgttccactgggagttccgtctcaca
cccgcctcggttccagtggtgtgcaggcagctggtacgccccctgctggcgatgacgcgg
gtactgcagaggcaggtggaggagctcgcaggactgctggggaggaaggatgcagagatc
caagactacaaggagaacggagccgtgctgaccagaggaagactactgactgatgtgttc
gacgaggagcgttacagacagaacttcttttcactgacgctccctcaggtggctgctgtg
caggagtgtgtgagcttcagccctgagctccaggatctctacgccgctgtgagcagccag
agaggaggccagcgcagacgcaaacgcagacgctccaacgcctcagcagacacacacacg
gaggacgacacacacacccccgcccaggaccagggaccagaacacaacacacacacacag
gtccaggaccaggggccggaacaacacaacacacacacacacgaccagcgacctgaccac
aacacacacacacacacagaccacatgcatgagccaggcagcagaagcagctcagaccac
ggaaccactccaggcccgggggagcagaagaaccctggaggaggatcgagcggagaacct
caaaagtccgagagtgagcagacggtcccccagatggcggctcctgtggatcgctccgtc
tctcgtcccaagaagaagaaagctgtgggactcttccggtga
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