Clupea harengus (Atlantic herring): 105891312
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Entry
105891312 CDS
T09045
Symbol
arhgap21b
Name
(RefSeq) LOW QUALITY PROTEIN: rho GTPase-activating protein 21
KO
K20315
Rho GTPase-activating protein 21/23
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105891312 (arhgap21b)
Membrane trafficking [BR:
char04131
]
Endosome - Golgi transport
Others
Others
105891312 (arhgap21b)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
105891312 (arhgap21b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH_9
PDZ_6
PH
PDZ
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
105891312
NCBI-ProteinID:
XP_031418615
Ensembl:
ENSCHAG00000008681
UniProt:
A0A6P8F3P9
LinkDB
All DBs
Position
25:5999141..6052864
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AA seq
1880 aa
AA seq
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MATHRMGPSDEDDDARLSARLPMGEDGAEHGDSTGSLFQLEEGEDDEESFSWPGPKTLRL
RRTSQGFGFTLRHFIVYPPESAVHSSLKEEEHGHRGRQRNRLEPMDTIFVKQVKDGGPAN
GAGLCTGDRIVKVNGESIIGKTYSQVIALIQNSEAFLELCVMPKDEDILQLAYSQDAYLK
GHDPYSGNARHIPQPPPVCYPRVDGKPPSGMAQATESPSPGGLPPPELGYRVEIPVPPSP
PPPMPMPMPISKAQTAVCVCSESGVRTVVVPPDGHMGHPGPGHRADYMMMGPDPVLIRPR
PGVASGGRPSYPHPRKADLYPAYHGDPYGMQPVHYHPAASASPGSHQNIDWRSYQTYREY
IDNKGLHTYGRSIQERLDSLRAATQGGHLAMPCGPPPLAHGWDPRLRRRSTSHERSYAGP
PLPPPPRSASQDRMSGSERARHHHHPDWPRSASPGRPRPQSPCTLHGLRRALDLHQPAAW
PADRRMYARAEPQQRPSRQSLPPRALLHRSPPGYGPNSSMRGRAQIGIRTDIPPPNVPTE
RPSRLGMSLTPETGPKDPRVVGNHLSHPPHHLQLQQQQQRARAETAETGRERDRETGRER
DLGVGLRSSSCSSTPPSLRQQHQRGAGALRPHLQDQQGPTNGRSGPVEGVKMREKPPTGS
KNGTPPLRHPSYILAVNEAEGGASGQAGTGVAGVAGVPGVCWLPNDARREVQMRRIGEQL
NESFSSTLDESLDSIPFIDEPASPSVDRDAAHIPASVVISGTSAPSAATPSPAASSPLIR
RQLSHDQESLKNAILESQNGTKTERSKSYDEGLDNYREEGRGRSSSKHMPSLKVFRKAVD
GHKSSEDSGSRRDSSSDVFGDSSKEGWLNFRQLNTDKNKRVGGGTRGWKQMYSVLRGHSL
YLYREKKECLAHANSQLEEVPQPICIKACLIDISYSETKRKNVLRLTTSDCEYLCQAESR
DDMLSWIRVIQENSNLDEENATMTSTDLINRKIREYTLMSAPSKSKSQSPHSPKYEDRKS
YSKDDSSPPRDKAAWRRGIPGLMRKTEKKPTAGITFGVRLDNCPPARLNRFVPLIVEVCC
TLVEERGLDYTGIYRVPGNNAAISSMQEELDTKGMGDIDIEEDKWRDLNVISSLLKSFFR
KLPEPLFTNEKYEDFIDANRTPDAVKRLKELKRLIHELPDHHYETLKYLSGHLKAVSENC
EKNKMEPRNLAIVFGPTLVRTSDDNMTHMVTHMPDQYKIVETLIQHCDWFFNEEGEEEPI
AVELYSAVQSQPVPNIDHLLPNIGRTAASAGEVSDSASDSAKSKQGSWGSGKDQYSRELL
RSSIFASRKRKKPKDKPQPSSSDDDLDALFPKKESQEQSAQPAWPQQPSEGKGDDEEEDD
EGEGQEEEEGRRENGERVSGEEQTASRLDQTPDALLSNGGDDDGSAHQPEPYTCSCPSPK
PGSSPILSYRMQSARQCSLSDPPSSVCDEGCTSDLGTLNSTSSQASVGRPPRQRGRIPGS
WTGDGAALAAEVCSITSDYSTTSSMTFMTADRDGGSTIMSPDLRSGAESRATVATHDDDA
DDERSELVSEGRPMETDSESDLSVFAVCREAGSCSEESGQVPAPVAAAAPEMANACGSSL
VASQRLIAGDTLARKKSNRHKTDSESSVESGREGGRLAWVLGAVKGRSSTGSQSSSSPRC
SGEQPTGVVVVGSDQGGSSSVAGAGVPADDDNPAWRLKITDRLKFRLRSSADDMFGVGRS
PETRAKRKGNIRRRHTMGGQRDFAELTVLGEPSELSAVDRLKPKCSSQDFSIGDWIVRER
HRVSNPEVSLLGAASSSSSSQTLQGLGHDCPLHAFVQGDGLLPNGDGPSTQGKSLSLGAD
AHPHKLSGSQVVRSRFYQYL
NT seq
5643 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacatcggatggggccgagcgacgaggacgatgatgcaagactctcagccaga
ctgcccatgggcgaggatggagccgagcatggggactccacgggtagtctgtttcagctg
gaggagggagaggatgatgaggagtcgttctcctggccgggccccaaaaccctgcgcctc
cgacgcacctcacagggcttcggcttcaccctgcgccacttcatcgtgtacccacccgag
tctgccgtgcattcctcccttaaggaagaagagcatggccatagagggagacagcggaac
aggctggagccaatggacacaatctttgtgaagcaagtgaaggacggaggaccagcaaat
ggagctggtctctgcacaggagaccgtatagtcaaagtgaatggggaaagtatcattggc
aagacgtactcgcaggtgatcgccttgattcagaacagcgaagcattcctggagctctgt
gttatgccaaaggatgaggacattctgcagctggcctactcccaggatgcctaccttaaa
ggccacgacccctacagcggcaacgcgcgtcacatccctcagccgccccctgtatgctac
ccccgagtagacggtaagcccccctcagggatggcccaggcgaccgagagcccatccccg
ggggggctgccaccaccagagctgggctaccgtgtggagattcctgtgccaccctcccct
ccccctcccatgcccatgcccatgcccatctccaaggcgcagacggccgtgtgcgtgtgc
agcgagagtggcgtgcggacggtggtggtgccgcccgacggccacatgggccacccgggc
cccggccacagggccgactacatgatgatgggccccgatccggtcctgatccgaccccgg
cccggcgtggcgtctggcggacggccctcctacccccacccccgcaaggcggacctctac
ccggcgtaccacggcgatccgtacggcatgcagccggtccactaccacccggcggcctct
gcctcccccggatcgcaccagaacatcgactggcgctcctaccagacctaccgggagtac
atcgacaacaaggggctgcacacgtacggccgcagcatccaggagcggctggacagcctg
cgcgccgcgactcagggcggccatctcgccatgccttgtggaccgcctcccctcgcccac
gggtgggacccccggctgcgtcgccgcagcacgtctcacgagcgctcctacgcggggccc
cccctcccgccccccccacgcagcgcctcccaggaccggatgagcggctccgaacgggcc
aggcatcaccatcaccccgactggccccgcagcgcgtccccaggacggcctcgtccgcaa
agcccgtgcacactccacggactacgtcgagcactggacctgcaccagcctgccgcctgg
ccggcggatcggcgcatgtacgcgcgggccgagccccagcagcgccccagcaggcagtcc
ctcccgccgcgggccctcctgcaccggagcccgcccgggtacggcccaaacagcagcatg
cgcggcagagcccagatcggcatccggaccgacattccccctcccaacgttcccacggag
aggccctcccgcctgggcatgagcctgactcccgaaactggccccaaagaccctagagtg
gtgggcaaccacctgtctcatccgccccaccacctccagctgcagcagcagcagcagcgt
gcgcgagcggagacggcggagacgggccgagagagggaccgagagacgggccgagagagg
gacctaggggtggggctgcgctcctcttcctgctcgtcgacccctccctctctgagacag
cagcaccagagaggggcgggggctctcaggccacacctccaggaccagcagggcccaacc
aatgggcgcagtggaccagtcgagggtgtaaagatgcgtgagaagccgcccactgggtcg
aagaacgggactccgccgctgaggcacccgtcctacatcctggcggtgaacgaggcagag
ggaggtgccagtgggcaggcgggcacaggagtggcgggcgtcgcaggagtgccaggcgtg
tgctggctgccgaacgacgcccggcgcgaggttcagatgagaaggatcggcgagcagctc
aatgagtccttctccagcacattggacgagtcgctcgactccattcccttcattgacgag
cccgcgagccccagcgtcgaccgtgacgccgcgcacattccagcgtctgtggtcatctct
ggcacttccgccccctctgctgccacgcccagccctgccgcctcgtcccccctcatacgc
cgacagctgtcacatgaccaagaatctctcaaaaatgccatcctggaatcccagaatggg
accaagacggagcggtcgaagtcctatgacgaaggcctggacaactacagagaggagggc
agaggacgctcctcctctaaacacatgcccagtctgaaggtgttccgtaaggctgtggat
ggacataagtcctcagaagactcgggctcccggagagactcgtcctcagacgtcttcggt
gactcttcaaaggagggatggttgaacttcaggcagctgaacaccgacaagaacaagcgt
gtgggaggcgggacccgagggtggaagcagatgtactcggtcctgcgaggccactccctc
tacctctaccgggagaagaaggagtgcctggcccacgccaactctcagctggaagaggtg
ccccagccaatctgcatcaaggcctgcctgattgacatctcctacagcgagaccaagcgc
aagaacgtgctgcggctcaccacgtccgactgcgagtacctgtgccaggcggagagccgc
gacgacatgctgtcctggatccgcgtcatccaggagaacagcaacctggacgaagagaac
gcgacgatgacgagcacagacctgatcaaccgcaagatcagagagtacaccctgatgagt
gctcctagcaagagcaagagtcaaagcccccactcccccaaatacgaggacagaaagagc
tacagtaaagatgactcaagccctccgcgagacaaagctgcgtggaggagggggatccct
ggccttatgagaaagactgagaagaagcccacggctgggatcacctttggggtgcgcctg
gacaactgtccccctgcacggttgaacagatttgtgccgctaatcgtggaggtgtgctgt
acgctggtggaggagcgcgggctggactacacaggcatctaccgcgtccccggcaacaac
gccgccatctccagcatgcaggaggagctggacaccaaaggcatgggtgacatcgacatc
gaggaggataaatggcgggacctcaatgttatcagcagcctcctgaaatccttctttagg
aagcttccggaaccattgtttacaaatgagaaatatgaagattttatcgatgccaacagg
acaccagatgctgttaaaaggctgaaagagctaaaaaggctgatccatgagttgccagac
catcactatgaaacgctcaagtacctctcggggcatctgaaggccgtgtctgagaactgc
gagaagaataagatggagccacggaacttggccattgtctttggccccacgctggtgcgg
acatcagacgacaacatgacccacatggtcactcacatgccagaccagtacaagatagtg
gagaccctcatccagcattgtgactggttcttcaatgaagaaggagaggaggaaccaata
gcggtggagttgtacagcgcggtgcagtcccaaccggtccccaacattgaccatctgctc
cccaacatcggacgcaccgccgcctctgcaggagaagtctcagattcagccagtgattct
gccaaatctaagcagggctcgtggggttctgggaaggaccagtacagccgggagctgctg
cgctcctccatcttcgccagccgcaagcgcaagaagcccaaagacaagccgcagcccagc
agctcggacgacgacctcgacgccctcttccccaagaaggagtcccaggagcagagcgcc
cagccggcctggccgcagcagccctcggagggcaagggggacgacgaggaggaggatgac
gaaggcgagggccaggaagaggaggaaggccggcgggagaacggcgagcgcgtgagcggc
gaggagcagacggcgagccggctggatcagacccccgacgcgctgctgtccaacggcggc
gacgacgacggctcagcccaccagcctgagccgtacacttgctcctgcccctcgcccaag
ccaggctcctcccccatcctgagctaccgcatgcagtcggcgcggcagtgctcgttgtcc
gatccgccgtcgtcggtctgcgacgagggctgcacgtccgacctgggcacgctcaacagc
accagctcccaggcctcagtgggacgtcccccacggcagcgcggcaggatccccgggagc
tggaccggtgacggcgcggccctggcggccgaggtgtgctccatcacctccgactactcc
accacctcctccatgaccttcatgacggcggacagggacggcggcagcaccatcatgagc
cccgacctgcgctccggcgccgagagccgcgccaccgtcgccacgcacgacgacgacgcg
gacgacgagcgcagcgagctggtgagcgagggccggcccatggagacggacagcgagagc
gacctgtcggtgttcgccgtctgccgagaggcggggtcctgctcggaggagagcgggcag
gtgccggcaccggtggcggcggccgcaccggagatggccaacgcctgcgggagcagcctg
gtggcgtcgcagcggctcatcgccggggacacgctcgcacgcaaaaagagcaaccggcac
aagacggacagcgagtcctcggtggagagcgggcgggagggcgggcggctggcgtgggtg
ctgggggcggtgaagggtcgctcgtccaccggcagccagagctcctcgtccccgcgctgc
agcggagaacagcccaccggcgtggttgtcgtcggcagcgaccagggcggcagcagcagc
gtggctggcgcaggagtccccgccgacgacgacaaccccgcctggcggctcaagatcacc
gaccgcctcaagttccggctgcgctcgtctgccgacgacatgttcggcgtggggcgctcg
cccgagacgcgagccaagcgcaagggcaacatccgccggcggcacaccatgggcggccag
cgggactttgccgagctgacggtgctgggcgagccgtcggagctgtcggccgtggaccgg
ctcaagcccaagtgcagctcgcaggacttctccatcggcgactggatcgtccgtgagcgc
caccgcgtcagcaacccggaggtcagcctgctgggcgccgcgtcctcctcctcttcctct
cagacgctccagggcctcggccacgactgcccgctgcacgccttcgtccagggggacggg
ttgctgcccaatggagacggcccctccacccagggcaagagccttagcctgggtgctgac
gcgcacccccacaaactctctggctcacaagtggtccgctcacgtttctatcagtacctg
tga
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