Clupea harengus (Atlantic herring): 105891316
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Entry
105891316 CDS
T09045
Symbol
cldn1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03272
Virion - Hepatitis viruses
char04382
Cornified envelope formation
char04514
Cell adhesion molecule (CAM) interaction
char04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
105891316 (cldn1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
105891316 (cldn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
105891316 (cldn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
105891316 (cldn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
char03037
]
105891316 (cldn1)
04147 Exosome [BR:
char04147
]
105891316 (cldn1)
Cilium and associated proteins [BR:
char03037
]
Other cilia and associated proteins
Stereociliary proteins
105891316 (cldn1)
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
105891316 (cldn1)
Exosomal proteins of colorectal cancer cells
105891316 (cldn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF1218
TM225
Motif
Other DBs
NCBI-GeneID:
105891316
NCBI-ProteinID:
XP_012672933
UniProt:
A0A6P3VI99
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All DBs
Position
25:6374988..6377660
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AA seq
209 aa
AA seq
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MANGGVQLLGFSLAMLGLFGIIASTVMVEWKASSYAGDNIITAQAMYEGLWKSCVSQSTG
QIQCKSYDSLLQLPGELQATRGLMVFAILLTFISIMVAVVGMKCTTCLAGEKEQKSKIAL
AGGILFIIGGLTSLVATSMYGHKIAKDFYNPFTPTNSRYEFGAALFVGWAASILTIIGGG
FLCCTCSSGSSGKAPNYPASRGGQSGSHV
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacggaggggttcaacttcttggtttcagtttggctatgctgggccttttcgga
ataattgcatcgactgttatggtggaatggaaagcatcttcatatgcaggcgacaatatt
ataacagcccaagccatgtacgaaggactttggaagtcgtgtgtgtctcagagcactggg
cagattcaatgcaaaagctacgattcgttacttcagctgccaggtgagctgcaggccacc
cgaggcctgatggtgttcgccatcttgctgacgttcatctccataatggtggctgtggtg
ggcatgaaatgcaccacatgcttggctggcgagaaggaacagaaaagcaaaattgccctg
gcaggaggaattctcttcattataggaggactgacttctcttgttgcaaccagcatgtat
gggcacaagatagccaaggacttctacaacccattcactccaacaaactccagatatgag
ttcggtgccgctctcttcgtgggatgggcagcgtctattctcacgatcatcggaggaggc
ttcttgtgctgcacctgcagcagtggatcgtcgggaaaagcacccaactaccccgcatct
cgtggaggtcagtccggctcacatgtgtag
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