Clupea harengus (Atlantic herring): 105891345
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Entry
105891345 CDS
T09045
Symbol
fzr1b
Name
(RefSeq) fizzy-related protein homolog isoform X1
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04110
Cell cycle
char04120
Ubiquitin mediated proteolysis
char04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105891345 (fzr1b)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
105891345 (fzr1b)
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
105891345 (fzr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105891345 (fzr1b)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
105891345 (fzr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR19_1st
EIF3I
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
eIF2A
Beta-prop_RIG_1st
Beta-prop_Vps41
WD40_RFWD3
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
105891345
NCBI-ProteinID:
XP_031419133
Ensembl:
ENSCHAG00000022116
UniProt:
A0A6P8ESH1
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Position
25:complement(5413633..5422510)
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AA seq
486 aa
AA seq
DB search
MDQEYERRLLRQLNHQNLPEAQLAKPGYATCSPVSIKSGDRFIPTRAGSNWSINFHYANE
NCRSPSQNHRSKDSSADTGKDAVAYAALLRNELLGAGIETVPDPHTDDRRHAILSQDTCS
LFKYSVQSKRVPFDNGNEVSPYSLSPLSNKSHKLLRSPRKPARKISKIPFKVLDAPELQD
DFYLNLVDWSAGNLLSVGLGACVYLWSACTSQVTRLCDLSVDGDSVTSVCWNERGSLVAV
GTHKGFVQIWDAAASRKLTCLEGHSARVGALAWNGEQLSSGSRDRVILQRDIRTPPSAER
RLQGHRQEVCGLKWSPDHQHLASGGNDNKLLVWNSSSLLPVQQYSDHLAAVKAIAWSPHQ
HGLLASGGGTADRCLRFWNTLTGQALQSTDTGSQVCNLAWSKHANELVSTHGYSQNQILV
WKYPSLTQVAKLTGHSYRVLYLAVSPDGEAIVTGAGDETLRFWNVFSKTRCTKESKSVLN
LFTRIR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggaatatgaaagacgcctactgaggcagctcaaccatcagaacctccccgag
gctcaactggccaagcctggttatgcaacatgcagtcctgtcagtatcaagtcaggagac
agattcattcctactcgtgccgggagtaactggagcatcaatttccactatgccaatgaa
aactgtcggtctcccagtcagaatcacagatcaaaagattcttcagcagacacaggcaaa
gatgcagtggcatatgctgccctgctgaggaacgagctgctgggagcaggcattgagaca
gtccctgatccacacacagatgaccgtcgccacgccatcctttcccaggacacatgtagc
ctcttcaagtactcagtgcaatcaaagagagtgccttttgacaacggtaacgaagtctct
ccatactcactctccccacttagcaataagagccacaagctcttgcgctctccccgcaag
ccggcgcgcaagatctccaagatccccttcaaggtgctggacgccccggagttgcaggac
gacttctacctcaacctagtggactggtccgcggggaacctgctgagcgtgggcctgggg
gcgtgtgtgtacctgtggagcgcctgcaccagtcaggtgaccaggttatgtgacctgtcg
gtggatggggactcggtaacatcagtgtgttggaatgaaaggggtagcttggttgccgtg
ggaacgcataagggatttgtgcagatatgggatgcagcggccagtcggaagctgacctgc
cttgagggtcattctgcacgcgtaggtgcgttggcttggaacggggagcagctgtcgtcg
ggtagccgggaccgcgtgatccttcagagggacatccgcacccccccttctgctgagcgc
cggctgcagggccaccggcaggaagtctgcggcctcaagtggtcacctgaccaccagcac
ctcgcctcagggggaaacgacaacaagctgctggtgtggaacagctctagcctgctcccg
gtgcagcagtacagtgaccacctggcggcggtcaaggccatcgcatggtccccccaccag
cacgggctgctggcgtcgggcgggggcacagccgaccgctgcctccgcttctggaacaca
ctgacgggccaggcgctgcagagcaccgacactggctcacaggtctgcaacctggcctgg
tccaaacacgccaatgaactggtgagcacacacggctactctcagaaccagattctggtt
tggaagtacccctcactaacacaggtggccaagctgacagggcactcctaccgggtcctg
tacctggctgtctctccagatggggaggccattgtgacgggagcaggagacgagaccctg
aggttctggaacgtcttcagtaaaacacgatgcaccaaggaatccaaatccgtattaaac
ctcttcaccaggatacgatag
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