Clupea harengus (Atlantic herring): 105891352
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Entry
105891352 CDS
T09045
Name
(RefSeq) tubulin alpha chain isoform X1
KO
K07374
tubulin alpha
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04145
Phagosome
char04210
Apoptosis
char04530
Tight junction
char04540
Gap junction
char04814
Motor proteins
char05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105891352
09143 Cell growth and death
04210 Apoptosis
105891352
09144 Cellular community - eukaryotes
04530 Tight junction
105891352
04540 Gap junction
105891352
09142 Cell motility
04814 Motor proteins
105891352
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
105891352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105891352
03036 Chromosome and associated proteins [BR:
char03036
]
105891352
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105891352
04147 Exosome [BR:
char04147
]
105891352
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105891352
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
105891352
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
105891352
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105891352
Exosomal proteins of other body fluids (saliva and urine)
105891352
Exosomal proteins of colorectal cancer cells
105891352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
105891352
NCBI-ProteinID:
XP_012672981
Ensembl:
ENSCHAG00000001759
UniProt:
A0A6P3VJK0
LinkDB
All DBs
Position
21:25944173..25958021
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AA seq
450 aa
AA seq
DB search
MRECISIHVGQAGTQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVGEEDEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatttccattcatgtcggccaagccggtacccagatgggcaatgcatgc
tgggagctgtattgcctggagcacgggatccagccggacggccagatgcccagcgacaag
accatcggaggaggagacgactccttcaacaccttcttcagtgagactggagccgggaaa
cacgtccctcgcgccgtcttcgtggacctggagcccaccgttatcgatgaggtgcgcaca
ggtacctaccggcagctgttccaccccgagcagctcatcactggcaaagaagacgcagct
aacaactatgcccgcggacactacaccatcggcaaggagatcatcgacctggtgctggac
aggacccgcaaactggctgaccagtgcacaggtctccagggattcctcatcttccacagc
ttcggcggaggcaccggctccggcttcacctccctgctgatggagcgcctctccgtcgac
tacggcaagaagtccaagcttgagtttgccgtctacccagccccccaggtgtccactgca
gtggtggagccctacaactccatcctgaccacccacaccaccctggagcactccgactgc
gccttcatggtggacaatgaggccatctacgacatctgccgcagaaacctggacatcgag
cgcccatcctacaccaacctcaacaggctgattggccagatcgtgtcttccatcactgcc
tccctcagattcgatggtgccttgaatgtggacctgacagagttccagaccaacttggtg
ccctacccacgtatccacttccccctggccacctatgctccagtcatctccgctgagaag
gcctaccacgagcagctgtctgtggctgacatcaccaacgcctgcttcgagccagccaat
cagatggtgaagtgcgaccctcgtcatggcaagtacatggcctgctgtctgctgtaccgt
ggcgacgtggtgcccaaagatgtcaactctgccatcgccaccatcaagaccaagcgcacc
atccagtttgtggactggtgccccactggcttcaaggtgggcatcaactaccagcccccg
actgtggtgccgggcggagacctggccaaggtgcagagggccgtgtgcatgctgagcaac
accaccgccatcgctgaggcctgggcccgtctggaccacaagtttgacctgatgtacgcc
aagagggccttcgtgcactggtacgtgggggagggcatggaggagggagagttctccgag
gccagagaagacatggccgccctggagaaggattacgaggaggtgggcacagacagcgtc
ggagaggaggatgaggagggagaggagtactaa
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