KEGG   Clupea harengus (Atlantic herring): 105891384
Entry
105891384         CDS       T09045                                 
Symbol
pak1ip1
Name
(RefSeq) p21-activated protein kinase-interacting protein 1-like
  KO
K14830  protein MAK11
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:char03009]
    105891384 (pak1ip1)
Ribosome biogenesis [BR:char03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    105891384 (pak1ip1)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_EML WD40_Gbeta Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C PEP5_VPS11_N Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_DCAF12 ANAPC4_WD40 Ge1_WD40 Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_IP5PC_F NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_VPS8 WDR54 Beta-prop_WDR75_2nd Beta-prop_pof12 Beta-prop_IFT80_2nd B-prop_COPA_B_2nd BBS2_Mid Beta-prop_RIG_1st Beta-prop_EMC1_N Phage_T7_1_1 Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 105891384
NCBI-ProteinID: XP_012673011
Ensembl: ENSCHAG00000011894
UniProt: A0A6P3VIE7
LinkDB
Position
25:complement(5234219..5239511)
AA seq 360 aa
MGFEVEIVAGSYEQISFGYRVCRNGEDWTATADFTHHAHTACLSAVASTNRYIATGSKDE
TIQLYDMKKKIDQGALLHHDGTISCLEFYGTSHLLSGGEDGLMCVWRTKKWECLKTIRAH
KGQLSSLSVHPSGKLALSVGTDRTLRTWNLTDGRSAFIKTLKQSADLVKWSLEGDTYVVV
TNNIIDVYNLETATVTATITNPKRISSVKFLQNTCLAVAGDDESVRLYDLTTERCMCEFK
AHENRIKAVDSFMVDDFCVVVTASNDGLIKLWKLHLDEDPKPPALLLEVNTTARLTCLTV
FKPTAEDKPTEEQPTSSTATEDLPLPSKNKRVRIATEEVILEGDCKPKKTKRGGKKRKSQ
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgggctttgaagttgagatagtcgctggaagttatgagcagatttcatttggctatcgt
gtctgccgaaatggagaggactggacagcaacggccgactttactcatcacgcacacaca
gcctgcttgtcagctgtggcatccaccaacaggtatatcgccacaggcagtaaagacgag
accatccagctatatgacatgaagaagaagattgaccagggggccttactgcaccacgac
ggtacgatctcatgcctggagttctatggcacatcccacttactcagcgggggagaggac
ggactgatgtgtgtgtggaggacaaagaagtgggagtgtctgaaaaccatcagagcacac
aagggccaactatcatcactctctgtccacccatctggaaaactggctctgtcagtcggt
acagacagaacactcagaacatggaatctaaccgatggaagatcagcatttatcaaaacc
ctcaaacaaagtgctgatctagttaagtggtcactcgagggagatacatatgtggtggtg
accaacaatatcatagatgtttacaacctggagaccgccacagtgactgcaaccatcacc
aacccaaaaagaatatcatctgtcaaatttctacagaatacctgtctggctgtagctggc
gacgatgagtcggttcggctctatgacctcaccacagagaggtgtatgtgtgagttcaaa
gcccacgaaaacaggataaaagctgtggatagtttcatggtggatgacttctgtgttgtt
gtgacggcgtcaaatgatggattaatcaaattgtggaaactgcatcttgacgaggacccc
aagcctcccgcacttctgctggaggtgaacaccaccgcaaggctcacctgtctgaccgtg
ttcaagccaactgcagaggacaaacccacggaggaacagccaacctcttccacagccaca
gaagatctgccgttaccctccaagaataagagagtcaggattgctacagaggaggtgatt
cttgaaggagactgtaagcccaaaaaaacaaagaggggtggaaagaagagaaagagccaa
taa

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