Clupea harengus (Atlantic herring): 105891427
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Entry
105891427 CDS
T09045
Name
(RefSeq) F-box only protein 41-like
KO
K10316
F-box protein 41
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105891427
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105891427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
Zn_SUZ12
zf-Di19
zf-C2H2_7th_ZNF462
zf-C2H2_4
MctB
HTH_60
DUF1664
Motif
Other DBs
NCBI-GeneID:
105891427
NCBI-ProteinID:
XP_031440812
UniProt:
A0A6P8GZC6
LinkDB
All DBs
Position
18:8580485..8592550
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AA seq
671 aa
AA seq
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MTSRAHHEGAHLVSKESKIAECLVTGLKMVKSRKSEMAERAFSCPWCPLDFESVRSLCTH
LQETHPQEWLCALSMLTRALRPSLADSHARIELPCLGFRWPALPYNPEALEPPTVAVWSS
VGREGASGHVDAQQGQPGSGLALLEGLLMGELDRKNAEVHAAKKDKEKLRRAKDELEERN
AQLKRQLTIAAEMMAGLRQEVMEKHRELTTKERQVCELSVFLRDTALKEADAKLRLQEFI
EELLERAETRSQSVSVVSRHTYQQHMSPDKRWPRGVKRTLSLGSCVCERGCVCGRRWCLC
ERGCVCVSSDEGDDTWSADTSELSLWPHTPSRDISQAVCPFCAKQSQSQECVCMVLRCVF
AFLDTHTLLNAAVVCRAWRNVARHPSLWIRVTLENTHVSSTLLISLSRWCNQTRSLTMRN
LTAPRRHHEDTEEHYRNTRGCLESGLEVLLRATGRSLVELTVTNCPNILTDRCVWLASCY
CRSLQTLTYRSATDPVGPEVIWALGAGCRNITSLQVAPLQPCLQPSRFGNRCLQLIGRCW
PQLCEVGVGGAGCGVQGLASLVKSCVSLRKLQLHGVCEVSVALAQHLCREGLRCLETLEF
HSTPVSPDGLLHFHSMCGQLRCVLVQVNISDYFQNPDREEAHRHFNQTINKMQALQSSIL
SGILHLRLDRC
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcacgagcgcaccacgaaggagcgcatctcgtgagcaaagagagcaaaatcgcg
gaatgcctcgtaacgggcttaaagatggtcaagagcagaaagtctgagatggctgagcgg
gcgttctcctgcccatggtgtcccctggactttgagagcgtgcgttccctgtgcactcac
ctgcaggaaacgcatccccaagagtggctgtgtgccctgtccatgctcacgcgggcactg
aggccaagtctcgctgacagccatgcccggatcgagctcccctgcctgggcttccgctgg
ccagcgctcccttacaaccccgaagccctggagcctcccacggtggcggtctggagctcc
gtggggagagagggggcctcagggcatgtcgatgcccagcagggtcagcccggttcaggt
ttggctttgttggagggcctgctgatgggagagctggacagaaagaacgcagaggtgcat
gccgcaaagaaagacaaagagaaactgcgacgagcgaaggatgagctggaggagaggaat
gcgcaactcaaacgacagctcaccattgctgcagagatgatggccggccttcggcaggaa
gtgatggagaaacacagggagttgactacaaaggaacgacaggtgtgtgagttgagtgtg
ttcctgagagacactgccttgaaggaggccgacgccaaactgcgtctgcaggagttcatc
gaggagctgctggagagagcggagaccaggagtcagagtgtctcagttgtttcgagacac
acatatcagcaacacatgtctcctgataagaggtggccacggggtgtgaagcggacacta
tcgctgggctcgtgtgtttgcgagcgagggtgtgtgtgtgggaggagatggtgtttgtgt
gaaagagggtgtgtgtgtgtgagttcagatgagggggatgacacctggtcagctgacacc
tcagagctcagcttgtggccacacacaccgagtagagacatctcccaggccgtctgtcct
ttctgtgctaagcagagccagtctcaggagtgtgtgtgtatggtgctgaggtgtgtgttc
gcgtttctggacacacacacgcttctgaatgcggctgtggtgtgtcgggcgtggaggaac
gtggcacgtcacccttcactctggatccgcgtcactcttgagaacacacacgtctcctct
acactgctgatcagcttgtcgcgttggtgcaatcagacacgttctctcacaatgcggaac
ctcaccgcacccagacgccaccacgaggacacagaagaacactacaggaacacacgaggc
tgcctggagtcagggttagaagtgttgctaagggcaacagggcggagcctggtggaactg
acggtgaccaactgccccaacattctgaccgaccgctgtgtctggcttgccagctgctac
tgtcgctccctacagacactcacatacaggagtgcaactgaccctgtggggccagaggtg
atttgggcgttgggtgcgggctgcagaaacatcacctccctccaggtggcgccactgcag
ccatgtctgcagcccagtcgctttggaaaccgatgcctgcagctcataggccgatgctgg
ccacagctctgtgaggtgggagtcggaggggccggctgtggggtgcaaggactagcctcg
ttggtgaagagctgtgtgtccctcaggaaactgcagctgcatggtgtgtgtgaggtgagc
gtggctttggcgcagcacctgtgcagggaggggctgcgttgcctggagacgttggagttc
cactcgacccctgttagtccagacggtctgctgcactttcacagcatgtgtggccagctg
agatgtgtgttggttcaggtgaacatcagcgattacttccagaaccctgacagagaagag
gcccacagacactttaaccagacaatcaacaaaatgcaggcacttcagagttctattctc
tcagggatccttcatctcaggctggacaggtgctga
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