Clupea harengus (Atlantic herring): 105891505
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Entry
105891505 CDS
T09045
Symbol
fbxl13
Name
(RefSeq) dynein regulatory complex subunit 6 isoform X1
KO
K10279
dynein regulatory complex subunit 6
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105891505 (fbxl13)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
char03037
]
105891505 (fbxl13)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105891505 (fbxl13)
Cilium and associated proteins [BR:
char03037
]
Motile cilia and associated proteins
Nexin-dynein regulatory complex
105891505 (fbxl13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
LRR_At5g56370
F-box
LRR_EndoS
LRR_14
LRR_Zer-1
LRR_At1g61320_AtMIF1
LRR_R13L1-DRL21
TbpB_C
NUP120_helical
Motif
Other DBs
NCBI-GeneID:
105891505
NCBI-ProteinID:
XP_031421084
UniProt:
A0A6P8F7I9
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Position
3:27429818..27437014
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AA seq
809 aa
AA seq
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MASLENADPSLRRYILKNSLPRIFQALLAGLLASCPENPLHFIEEKLLAIQKSRDIYVNW
DAYADDDVEVDVYPSDENVVLDIMNIFIDPDDSDTMSPFFEEACYCYHKSLFKMCFMAWK
RYILKRKTERIILRQNMDAAQGHYSKKVLHYTFRIWIKWVQCKKKRKKDAVKKIQKVYEI
LHIRNIFFAWRYAVQDSKRSKEYFEKWEIGFRSHAIRHEKPSQQIDTTEKKDIISMLPSK
LSMKIFQYLESGDLLRCAEVCDTWMAITQTCSLWDKINFSGENHWIQSHDVEKILQAYRP
FVVHLNLRGCVSLQWPTFRCISECRNLQELNLSECTNINDETVRIIAESCQSLLYLNLSY
TYVTNRTLKILARCCMNLQYLSLAHCRKFTDKGLQFLATERGCHGLVHIDLSGCTQITVD
GFGHIAAGCSLLQHIVFDNMPTFTDKCLQVLTAKCHSLVTISVLESPHLTDTAFKTIAEV
ASLKKLRIQGNNHITDIGWKAVCKSSPKLSHLHAADCSKMTDACLKCIALLKNLTHLDIS
DSVRVSDVGLRYLTDGPSACKIREFDLSNCHVNDGVVLKIVQRCSVLRTLNLAYCESLTD
TAIEYFSNANCLLCLDITGCQIQDKGLTAAGGIQYLKKLNISECLCITDMGIEMFCRRAK
RLEDFDISHCVALSDLSIKSVSFYCKTVSRLIMAGCPKMTDSAMKYLTGSGPCLKELDVS
GCVLLTDRASRILLKGRQHFHSLTMLYCRGISKQAALRLQPGLKHWEHSRDDAPYWYGYD
NLQLKKRPEKQGTPLEYDDSGRNSSSLPT
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcatcactggaaaacgcagacccatcgctgagaagatatattctgaagaattccctt
cctcggatttttcaggctctcttagctggcctgctggcctcgtgtcccgagaaccccttg
cattttattgaggagaagcttttagcaatccagaagagcagggacatttacgttaactgg
gatgcctatgctgatgatgatgtggaggttgacgtttacccatctgatgaaaatgtggtg
cttgatataatgaatattttcatagacccagatgacagtgacacgatgtcaccttttttt
gaagaggcatgttactgttatcacaagagtcttttcaagatgtgcttcatggcctggaaa
aggtacatcctgaagaggaaaacagaaaggatcatcctgcgtcagaacatggatgctgct
cagggccactattcaaagaaagtcctgcattatactttcagaatatggataaagtgggtc
cagtgtaagaagaagagaaagaaggatgctgttaagaaaatccaaaaagtgtatgaaata
ttgcacattaggaacatattttttgcatggcgatatgcggtgcaggactcaaagaggtcg
aaggagtactttgagaagtgggaaataggcttcagaagtcatgccatcagacatgagaag
cctagccaacagatcgacaccactgagaaaaaagacattatttcaatgttgccgagcaag
ttgtctatgaagatctttcagtatttagagtcaggggacctgctgagatgtgctgaggtg
tgtgacacatggatggctataactcaaacctgcagtctctgggataagatcaatttttca
ggagaaaaccactggattcaaagccatgatgtagagaagattctgcaggcgtatcgtcct
tttgtggtccacttgaatctgcgtggttgtgtgtctctgcagtggcccacctttagatgt
ataagtgaatgcagaaatcttcaggagctcaatctgagtgaatgcaccaacatcaatgat
gagactgttcgaataatagccgagagttgtcagtccctactctatctgaatttgtcatac
acctacgtgacaaatcgaactctgaaaatccttgcaagatgctgtatgaatctgcagtac
ttgagtctggcccactgtagaaagtttacagataaaggtctgcagtttttggctacagag
agaggctgccatgggcttgttcacatagatctctctggctgcactcagataacagtagat
gggttcggacacattgctgctggatgcagtctgttacagcacattgtattcgacaacatg
cccacatttacagacaagtgcttacaggtgctgaccgctaaatgtcactctctggttaca
atttctgtcctggagtccccccatctcactgacactgcattcaaaaccatcgctgaagtg
gcgtctctcaaaaaattaagaatacaaggcaacaaccatattacagatatcggctggaag
gctgtttgcaagagttctcccaaactaagtcatttgcatgctgctgactgttcaaagatg
actgatgcctgtctgaaatgcatagcacttctgaagaatcttactcaccttgacatctca
gacagtgtaagggtcagtgatgttggcctgcgttacttaactgatggtccatctgcttgc
aagatccgagagttcgatcttagcaactgccatgtcaatgacggtgtggtcctgaaaatt
gtacagagatgcagcgtgctccgtaccctgaatctggcatattgtgagtccctaacagac
acggccattgagtacttcagtaacgccaactgtcttctctgtttggacataactggctgt
cagatccaggataaaggactaacagcagccggaggaattcaatatttaaagaagctcaat
atatctgaatgtctttgcataacagatatgggcattgagatgttctgtaggcgggccaaa
cgtctagaggactttgatatatctcactgtgtggcgctctcagacctgtctatcaaatcg
gtatccttctactgcaagactgtgtcccgactcatcatggcaggctgtccaaaaatgacg
gactcagccatgaagtacctgacaggctctggaccctgccttaaagagctggatgtcagc
ggttgtgttctcctcactgaccgtgcctctcgcatcctgctcaagggccgccaacacttc
cactccctcaccatgctgtactgtaggggaatctccaagcaggcagcattgcgccttcag
cctggcctaaaacactgggaacacagcagagatgacgctccctactggtatggctatgat
aacctgcagctaaagaagaggccagagaagcagggcactccattggaatatgatgacagt
ggtcgtaacagcagcagtctgcctacatga
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