Clupea harengus (Atlantic herring): 105891547
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Entry
105891547 CDS
T09045
Name
(RefSeq) far upstream element-binding protein 2 isoform X1
KO
K13210
far upstream element-binding protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105891547
03041 Spliceosome [BR:
char03041
]
105891547
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
105891547
Spliceosome [BR:
char03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105891547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
105891547
NCBI-ProteinID:
XP_031418098
Ensembl:
ENSCHAG00000005963
UniProt:
A0A6P8F083
LinkDB
All DBs
Position
24:13904767..13917321
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AA seq
739 aa
AA seq
DB search
MSEYNAAPQPGAGAALGAGGLKKDAFADAVQRARQIAAKIGGDAGPPMNNNGGGESYPFA
AQKRSLEDAGTDSDGPDHFYQHSHLSTDQPESKKMATQSQSDRDASALCEWASQAPISAQ
LAALSQQSNVTRPSQVSEDYKVPDGMVGLIIGRGGEQINKIQQDSGCKVQIAPDSGGLPD
RCVSITGSPECILMPPMVVENMVDNKAKMLLDEIVSRGRGTPPTAFHENGGQGGQGGGGP
GGQGGPGGQGHMQEMIIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDASQGPNMDKPL
RIIGDPYKVQQAREMVQEILRERDHPGFENRGEFGGGGGGGGGSRMGGGVEIPVPRHSVG
VVIGRSGEMIKKIQNDAGVRIQFKPDDGSGPDKIAHIMGPPDRCEHAASIITDLLQSIRA
REEGGGPGDSRGFEGPPGPPGTGGMPPGGGRGRGRGPGGWGGPPGGEMTFSIPAHKCGLV
IGRGGENVKAINQQTGAFVEISRQPPPNGDPNFKLFVIRGSPQQIDHAKQLIEDKIEGPL
CPVGPGPGGPGPAGPMGPYNPNPYQPGPPGGPPHGGPPGGPQYAPQGWGNTYQPWQPPAP
HDPSKAAADHSAAWAAYYAQYYQQPQGGAMPGQNPGAPAAAPAPTEQNQQAQAAGGQPDY
TKAWEEYYKKMGTETAQAGTPVAPAAAAAAAAAAPAATGAAGQTDYSAAWAEYYRQQAAY
YGQTGQSQPAAPQQGQQAQ
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtacaacgcggcgccgcaaccgggtgccggtgcagccctaggagcgggtgga
ctcaagaaagatgcctttgcggacgcggttcagcgagcccggcagattgcagccaagatt
ggtggagatgccggcccccccatgaataacaatggaggaggcgagagctaccccttcgct
gcgcagaaacgctctctggaagacgcaggtacagatagtgacgggcctgatcacttctac
caacactcgcacttatcaacagatcagccagagagtaagaagatggccacccagagccag
agcgacagagatgctagtgccctctgcgagtgggcctcacaagcacccatcagtgcacag
ttggcagccctgtcccagcagagcaacgttactcgaccctcacaagtatcggaggactac
aaagtgcctgacggaatggtcggactgatcattggtcgaggaggagaacagatcaataag
atccagcaggattccggctgcaaggttcagatcgccccggacagcggaggcctccccgac
cgctgtgtctccatcaccggatctcctgagtgcattcttatgcctcccatggtcgtggag
aacatggtggacaataaagctaagatgctattggacgagatcgtgtctcgaggccgcggg
accccgcccactgccttccatgagaacggaggacaaggtggacaaggaggaggaggaccg
ggaggacaaggaggccccggaggacagggtcacatgcaggagatgatcatccctgcgggc
aaagccggcctcatcatcggcaagggaggagagaccatcaaacagctgcaggagcgtgcc
ggtgtgaagatgatcctgatccaggacgcttctcaggggcccaacatggacaagccgctg
cgcatcatcggcgacccctacaaagtgcagcaagctcgtgagatggtgcaggagatcctg
agggagagggatcaccccggctttgagaaccgcggcgagttcggcggtggcggcggcgga
ggcggcggctctcgtatgggagggggcgtggagattccagttccgcgccactctgtggga
gtcgtgattggccgaagcggagaaatgatcaagaagatccagaacgacgctggggtcagg
atccagtttaaaccagacgatggcagcggtcctgataagatcgcccacatcatgggtccc
cctgaccgctgtgagcacgccgccagcatcatcaccgacctgctgcagagcatccgcgcc
cgcgaggagggaggagggccgggagacagcaggggctttgagggacctcctggccctccc
gggaccggcggcatgccccctggtggcgggcgtgggcgtggacgcgggcccggcggctgg
ggcggcccccccggcggcgagatgaccttctccatccccgcccacaagtgcggcctggtg
atcggccgcggcggcgagaacgtgaaggccatcaaccagcagacgggcgccttcgtggag
atctctcgccagccgccgcccaacggagaccccaacttcaagctgttcgtcatccgcggg
tcgccacagcagatcgaccacgccaagcagctcatcgaggataagatcgagggtcctctg
tgtcctgtcggtcctggtcctggtggtccgggccccgcaggtccaatgggcccctacaac
cctaacccctaccagcccggccctccaggaggacccccacatggagggcctccaggggga
ccccagtacgcccctcaagggtggggtaacacctaccagccatggcagcctcccgccccc
catgatcccagcaaagcagccgctgaccacagtgcagcctgggctgcctactacgcgcag
tactaccagcagccacaggggggcgccatgccgggtcagaacccgggcgccccagcggcc
gcccccgcccccacagagcagaaccagcaggcccaggcagccggtggccagccagactac
accaaggcctgggaggagtactacaagaagatgggtacggagacggctcaggcaggtact
ccggttgccccggcagcggcggcagcagcagcagcagcggccccagcagccaccggagcg
gcgggtcagaccgactacagcgccgcctgggccgagtactacagacagcaggccgcttac
tacggccagaccggccagagccaaccggccgcaccacaacaaggacaacaggcgcagtga
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