KEGG   Clupea harengus (Atlantic herring): 105891549
Entry
105891549         CDS       T09045                                 
Symbol
srfa
Name
(RefSeq) serum response factor a
  KO
K04378  serum response factor
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04010  MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:char00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    105891549 (srfa)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:char03000]
    105891549 (srfa)
Transcription factors [BR:char03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   MADS-box responders to external signals
    105891549 (srfa)
SSDB
Motif
Pfam: SRF-TF
Other DBs
NCBI-GeneID: 105891549
NCBI-ProteinID: XP_031418079
Ensembl: ENSCHAG00000006544
UniProt: A0A6P8F065
LinkDB
Position
24:complement(13945669..13970726)
AA seq 632 aa
MGTRGGVRSGNGTGLTTLQVANTSGGLGGINTGMTMPDGGRYNERESAEVVVSCSDAESD
SGDDEDTGSAGDRRGVKRERAEMEVGSSSGAAGLERGAYGASAGGVTGAKPGKKTRGRVK
IKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQPM
ITSDTGKALIQTCLNSPDSPAPRSTSDPSSEQRMSATGFEETELSYQVAEGADGVAAAGA
ENRAGFTLSSLQGGAPSNTSTPPSSSSSSSSPPPLPSSSSSTSSSAVPCWSGVVTTQSGS
LCANGTVLKATNMLTHAQAHAHTTTTATGMVLPQGITIMSGTTLPPGTHTIPLSQLQAHS
LTFQTTASTSSSSTSSSSASSSSTTQPHTQTLQTLQALQALQAIQTPQQHQHQQQQHLHQ
HQQHPMGLPFVTATTTAAAAGAVTPFSHALSQQQLQQAAQTHTFLRLPATVSLSGAGLPQ
QLQLVQSSSQQGGAIISSSSDGTSTSDINHTTVSSTVSHPTTIITSSASSAGGHMMYPSP
HTVMYATPTAEGGGGLTVLNPFPPSSTIQLSHSQAQDTGAISQMFFTSPQGTVQIPVSAV
PLHSMLIGQQPGGSSSNLTELRVVSLDSTKAD
NT seq 1899 nt   +upstreamnt  +downstreamnt
atgggcactcgagggggtgtgcgctctggtaacgggactggattaaccacgctacaggtt
gccaatacatctggaggtctcggtgggataaacacgggaatgaccatgcctgacggcggc
agatacaacgaaagggagtccgctgaggtggtcgtcagttgctccgacgcagaatcggat
tcgggggatgacgaggacacaggttcagccggggacaggagaggagtgaagcgtgaaaga
gcggagatggaagtcggaagctcctcgggagcagcgggcttggagcgcggtgcatacggt
gcttcagcaggtggcgtgaccggtgcgaagccaggcaagaaaactcgcgggcgagtcaaa
attaaaatggaatttatcgacaacaagctgaggcggtacacaactttcagcaaaaggaag
acggggatcatgaaaaaggcgtatgagttgtccactctgacgggcacccaggttctgctg
ctggtggcgagtgagacgggtcacgtctacacgttcgccacgcgcaagctgcagcccatg
atcaccagcgacacgggcaaggcgctgatccagacgtgcctgaactcgcccgactcgccg
gcgccacgctcgacctccgaccccagcagcgagcagcgcatgagcgccacgggcttcgag
gagaccgaactcagctaccaggtggcagagggggcggacggggtcgcagccgccggagcg
gagaacagggctggtttcaccctctcctctctccagggcggagcccccagcaacacctcc
acccctccctcctcctcctcctcctcttcctcccctcctcctctcccatcctcctcctcc
tccacctcctcctctgctgtcccctgctggtctggagtggtcacgacgcagagcggcagt
ctgtgtgccaacggcaccgtgctgaaggccaccaacatgctcacacacgcgcaggcgcac
gcacacaccaccaccacggcgaccgggatggtcctgccgcagggaatcaccatcatgtca
ggcaccactctcccacccggcacacacaccatccccctcagccagctgcaggcacactct
ctgaccttccagaccaccgcctccacctcctcttcctccacctcctcctcttccgcctcc
tcttcctccaccacccagccacacacacagacgcttcaaacgcttcaggcactacaggcg
cttcaggccattcaaacgccgcagcagcatcagcatcagcagcagcagcatctgcatcag
caccagcagcatcctatggggctgcccttcgtcacggcgaccaccaccgccgccgccgcg
ggcgccgtcactcccttctcgcacgcgctgtcgcagcagcagctgcagcaggccgctcag
acacacaccttcctgcgcctgcccgccaccgtctcgctctcaggtgccggtctccctcag
cagttgcagctggttcagtcctccagccagcagggcggcgctatcatcagcagcagcagc
gacggcacctccacctccgacatcaaccacaccactgtcagctccactgtctcccacccc
accaccatcatcacttcctcggcctcctccgcaggcggtcacatgatgtaccccagccct
cacactgtcatgtatgccacgcccactgccgaggggggcggcggcctcaccgtgctcaac
cccttccccccgtcctccaccatccagctctcccattcgcaggcacaggacacaggagcg
atttctcagatgttcttcaccagtccacagggcactgtccaaatccccgtctctgctgtt
ccactgcactcgatgctgattggtcagcagccggggggtagcagcagtaacctgacagag
ctgcgagtggtcagcctggacagcaccaaggccgattga

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