Clupea harengus (Atlantic herring): 105891554
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Entry
105891554 CDS
T09045
Symbol
desma
Name
(RefSeq) desmin a
KO
K07610
desmin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04519
Cadherin signaling
char04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
105891554 (desma)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105891554 (desma)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105891554 (desma)
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
105891554 (desma)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF8429
PMD1-like
DUF7491
T7SS_ESX_EspC
CCDC192
DUF4200
KIF21A_4th
CCDC89
Motif
Other DBs
NCBI-GeneID:
105891554
NCBI-ProteinID:
XP_031437785
Ensembl:
ENSCHAG00000021709
UniProt:
A0A6P8GSJ8
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All DBs
Position
2:8338429..8351264
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AA seq
482 aa
AA seq
DB search
MSKNYSASAQSASSYRRTFGSGYGGLGSSMYSGSSGRGSSGASHSSSRVYEMSRSSNMAP
MFSSGRSSGASSGYGGGAMRSYAGMGEKLDFNLADAMNKDFLDTRTNEKAELQHLNDRFV
NYIEKVRFLETQNSTLMVEIEKLRGREPTRIAEMYEEEMRELRRQVDGLTNQRARVEVER
DNLADDLQKLKLRLQEEIHQKEEAENNLSAFRSDVDAATLARLDLERRIEGLQEEIAFLK
KIHEEEIRELQSQMQETSVQVQMDMSKPDLSAALRDIRGQYEAIAANNISEAENWYKSKV
TDLNQAVNKNNDALRVAKQESMEYRHQIQSYTCEIDSLKGTNESLMRQMREMEDRNGRES
SGFQDSIARLEGDIAKMKDEMARHLREYQDLLNIKMALDIEIATYRKLLEGEESRVTLPM
QSFAAMGFRETSLEQQHGQQQQQKQHARSSEVHSKKSVLIKTIETRDGEVVSESTQHQQD
IM
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaactactccgcctccgcccagtcggcctcctcctaccgcaggaccttcggc
tccggctacgggggcctgggatcctccatgtactccggctcttccggccgcggttcttcc
ggcgcctctcactcgtcctcccgggtctacgagatgagtcgcagctccaacatggcaccc
atgttctcctccggccgctcctcgggagcctcttccggctacggcggcggcgccatgcgc
tcctacgccggcatgggcgagaagctggacttcaacctggccgacgccatgaacaaggac
ttcctggacacgcgcaccaacgagaaggccgagctgcagcacctgaacgaccgcttcgtc
aactacatcgagaaggtgcgcttcctggagacgcagaactccacgctgatggtggagatc
gagaagctgcgcggccgggagccgacgcgcatcgccgagatgtacgaggaggagatgcgc
gagctgcgccgccaggtggacgggctgaccaatcagagggcccgcgtggaggtggagagg
gacaacctggccgacgacctgcagaagctcaaactcaggctacaggaggagattcaccag
aaggaggaggctgagaataacctctccgcattcagaagtgatgtggatgctgccaccctg
gccaggctggacctggagagacgcatcgagggactccaggaggagatcgccttcctcaag
aagatccatgaggaggagatccgtgagctgcagtcccagatgcaggagacctccgtgcag
gtccagatggacatgtccaaacccgacctgtccgccgccctcagggacatccgcggccag
tacgaggccatcgccgccaataacatttcagaggctgagaactggtacaagtccaaggtc
actgacctgaaccaggccgtcaacaagaacaacgatgccctgagagtggccaagcaggag
tccatggagtaccgccaccagatccagtcctacacctgcgagatcgactctctgaaggga
accaacgagtctctgatgaggcagatgcgcgagatggaggaccgcaatggccgcgagtcc
tccggcttccaggacagcattgcccgcctggagggcgacatcgccaagatgaaggacgag
atggcccgccacctgcgtgagtaccaggacctgctcaacatcaagatggccttggacatt
gagatcgccacctacaggaagctcctggagggagaggagagcagggtcactcttccaatg
cagtcatttgctgctatgggcttcagagagaccagcctggagcagcagcacgggcagcag
cagcagcagaagcagcatgcccgctcatctgaggtccactccaagaagtccgttctgatc
aagaccattgagacacgcgacggcgaggtcgtgagtgagtctacacagcaccagcaggac
attatgtaa
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integrated database retrieval system