KEGG   Clupea harengus (Atlantic herring): 105891596
Entry
105891596         CDS       T09045                                 
Symbol
rapgef1a
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
  KO
K06277  Rap guanine nucleotide exchange factor 1
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04510  Focal adhesion
char04910  Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:char00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    105891596 (rapgef1a)
 09150 Organismal Systems
  09152 Endocrine system
   04910 Insulin signaling pathway
    105891596 (rapgef1a)
SSDB
Motif
Pfam: RasGEF RasGEF_N DUF659
Other DBs
NCBI-GeneID: 105891596
NCBI-ProteinID: XP_031426732
UniProt: A0A6P8FUD5
LinkDB
Position
7:complement(22676898..22742514)
AA seq 1187 aa
MSGKIESKQDSQRSHLSSFTMKLKDKFHSPKIKRTPSKKTSKPPAENTVKTPEKHVNKNL
SRLEEHEKDVVSALRYFKTIIDKMVVDKKVLEMLPGSASKVLEAVLPLVQVDPRIQHSSA
VSSCLNRVYQSLGNLIRWSDQVMLGDDDINLDDKETILSVTTVIRAVLDGVKELVKLTIE
KQEHPSPTSPVKPVPPVTIQDSTPEPPAEEADGEKEKERERDAPTNASTTAHSTEILTDS
TDEEVAPPKPPLPGLKVPEHCPPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPIGITK
QDYEADALQRRFSGGSHSYGGESPRLSPCSSMGKLSKSDEQLSSLEQDSGQCSRNTSCET
LDITEGYDPDYDFLHQDLSSVDQIHPLSIGGCLSPLPESHRESSSSSCPPLFHSPVGSPY
GASPPLQPPPLQSRVSAPPALPQKKRRSGALPTHASSLDGTGSPRALFERLPSQYDNISE
EELLALRASPGPPVPPFPVYAPVSPAPPFLYGSTPLHFSPSQSADIPQSPPPLPEKKSRH
ILKYMQFVEDYSEPQPSVFYQMPQSESIYEQRNKRFQEVYGFNDSFSSSDSMHDPLPPPA
LPPKQRQLASLSASPSSSSSSSLSSQLPAAQAGSLAAEGDDAAAAAAVNLSLSASNSSLT
APTSLDLAAPATPSQDLLLLANGSLESCAGSLATCLPSDASLSETCQPSLSESAKEEGGE
GEYVNLYSSTQANGDVTRPRRDPTPGAEDPTSDKDMADSESWRKSPDSGQSIEELDELSL
IDHEEIMSRITLKQETDDGPDVRAGSGDILLVHATETDRKDLVLYCEAFLTTYRTFITPE
DLIKKLHYRYTRFSHSPDTFKKRVSKNTFFVLVRVVDELCLVEMTEDILRQLMDLVFRLV
CSGELSLARVLRKNILDKVEQKKLMRYTMSLQPLAARGVAARPGTLHDFRSHEIADQLTL
LDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIILQEKAQDREKLL
LKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEYCTLIDSSSSFRAY
RAALAEVEPPCIPYLGLILQDLTFVHLGNPDLIHEKVNFSKRWQQFNILDSMRRFQQVHY
DLKHNEEIVSFFNDFSDHLAEEALWELSLKIKPRNIVRRKTDREEKT
NT seq 3564 nt   +upstreamnt  +downstreamnt
atgtcgggaaagatagaaagtaagcaagattcccagcgttcccatttgtcttccttcacc
atgaaacttaaggacaagttccactcgcccaaaatcaagaggacgccgtccaagaagaca
tccaagcccccggcagagaacactgtgaagaccccagagaagcacgtcaacaagaacctg
agtcgccttgaagagcatgagaaagacgtggtcagtgccttgcgttacttcaagaccatc
atcgacaagatggtggtggacaagaaggttctagagatgttacccggttctgccagcaag
gttctagaggccgttctgcccctggttcaggtggacccaaggatacagcacagctcggcc
gtgtcgtcgtgtctgaaccgggtctaccagagcctggggaacctcatccgctggtccgac
caggtcatgctcggagatgatgacatcaacctggacgacaaggagaccatcctgtccgtc
accacggtgataagagccgtgctggatggagtgaaggagctagtgaagttgaccatcgag
aagcaagagcacccctcccctacctcccccgtcaagcctgtgccccccgtgaccatccag
gacagcacaccggagcctcccgcagaggaggccgatggagagaaggagaaggagagagag
agggatgcaccgaccaacgcctccaccacggcccactccaccgagatccttaccgactcc
acggatgaggaggtggcccccccgaaaccccccctcccagggctaaaggttccagagcac
tgtcctcctgccctcccgcccaagaagcgccagtccgccccgtcccctacacgtgtggca
gtggtggcgcccatgagtcgagccaccagcggctccagtcttcccattggcatcacaaaa
caggactacgaggcggatgcgctgcagaggcgcttctccggcggcagtcactcttacggg
ggcgagtccccgcgtctctccccctgcagcagcatgggcaaactcagcaagtcagacgag
cagctctcctccttagagcaggacagcggacagtgctcacgcaacaccagctgtgagacg
ctggatataactgaggggtacgatccagactacgacttcctgcaccaggacctctccagt
gtagatcagatccatcccctctccataggggggtgcttgagccccctccccgaatcccac
cgcgagtcctcctcctcctcctgcccccccctcttccactccccggtgggctctccgtac
ggggcgtccccccccctccagccgcccccgctccagtcccgcgtcagcgcccccccggcc
ctcccccagaagaagcggcgcagcggggcgctgcccacccatgcctcgtcgctggacggg
acggggtcgccgcgggccctcttcgagcggctgccctcgcagtacgacaacatcagcgag
gaggagctcctagccctccgtgccagccccggcccccccgtgccccccttccccgtctac
gcgcccgtctcgccggccccgcccttcctctacggctccaccccacttcacttcagcccc
agccagagcgcagacatcccacagagcccaccgcccctgcccgagaagaagagccgacac
atcctgaagtacatgcagtttgtggaggactactctgagccccagccgtcggtcttctac
cagatgccccagagcgagagcatctatgagcagcgcaacaagcgcttccaggaggtgtac
ggcttcaacgactccttcagcagcagcgactccatgcacgaccccctgccaccccccgcc
ctgcctcccaaacagaggcaactggcgtccctctccgcctctccctcctcctcctcctct
tcgtctctgtcgagtcagctcccggcggctcaggctggctctctggccgcggagggagat
gacgcagccgccgccgccgccgtcaatctcagcctctccgcctctaactcctccctcact
gcgcccacgagcttggacttggcagccccggccacgcccagccaagacctgctgctattg
gctaacggctctctggagagctgcgctggttctctggctacctgtctgccctctgacgct
tctctctctgaaacatgccagccctctctgagcgagagcgctaaggaagaggggggcgag
ggcgagtatgtcaatctgtactcctccacccaggccaacggagacgtgacacgcccccgc
cgcgacccgacccccggagctgaggacccgacgtcagacaaggacatggcggattcagag
agctggaggaagtctccagactcaggccagagcatagaggagctggatgagctctccctc
atcgaccacgaggagatcatgtcccgcataacactaaagcaggagactgacgatgggccg
gacgtgagggctggatcaggtgatattctgttggtccacgcaacagaaaccgaccgcaaa
gatctggtgctgtattgtgaagcgttcctgaccacgtaccgtacgttcataaccccagag
gacctcattaagaagctccactatcgatacaccaggttctcccacagtccggacacgttt
aagaagcgcgtcagtaagaacaccttcttcgtgctggtgcgtgtggtggacgagctctgt
ttagtggagatgacggaggatatcctgaggcagttgatggacctggtgttccggctggtg
tgcagcggggagctgagtctcgcacgggttctccgcaagaacattctggacaaagtggaa
cagaagaagttgatgcgctataccatgtcactgcagccactggccgctagaggggtggcc
gcaaggccgggcacactccatgacttccgcagtcatgagattgctgaccagctcactctc
cttgacgctgagctcttctacaagatagagatcccagaggtgttgctttgggcaaaggag
cagaatgaggagaaaagccccaatctcacacagttcacagagcactttaacaacatgtcc
tactgggtccgctccataatcatcctccaggagaaagcccaggacagggagaaactactc
ctcaaattcatcaaaatcatgaagcacttacggaagctgaataactttaactcgtatctt
gcaatactctctgcgctggattctgcacccattcggagactggaatggcagaaacaaacc
tcagagggactggaggagtactgcactttaattgacagctcctcttcgttccgtgcgtat
cgggcagcactggctgaagtggagcctccctgcatcccctatctgggtctcatcctccag
gacttgacctttgtgcatctgggaaaccctgacctcattcacgagaaggtgaacttctcc
aaacgctggcagcagttcaacatcctggacagcatgaggcgctttcagcaagtgcattat
gatctcaaacacaatgaagaaatcgtctccttcttcaacgacttcagcgaccacctggca
gaggaggctctgtgggagctgtctctgaagatcaagccacgcaacatcgtgcgacgcaag
accgaccgcgaggagaaaacctag

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