Clupea harengus (Atlantic herring): 105891596
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Entry
105891596 CDS
T09045
Symbol
rapgef1a
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04510
Focal adhesion
char04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105891596 (rapgef1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
105891596 (rapgef1a)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
DUF659
Motif
Other DBs
NCBI-GeneID:
105891596
NCBI-ProteinID:
XP_031426732
UniProt:
A0A6P8FUD5
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Position
7:complement(22676898..22742514)
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AA seq
1187 aa
AA seq
DB search
MSGKIESKQDSQRSHLSSFTMKLKDKFHSPKIKRTPSKKTSKPPAENTVKTPEKHVNKNL
SRLEEHEKDVVSALRYFKTIIDKMVVDKKVLEMLPGSASKVLEAVLPLVQVDPRIQHSSA
VSSCLNRVYQSLGNLIRWSDQVMLGDDDINLDDKETILSVTTVIRAVLDGVKELVKLTIE
KQEHPSPTSPVKPVPPVTIQDSTPEPPAEEADGEKEKERERDAPTNASTTAHSTEILTDS
TDEEVAPPKPPLPGLKVPEHCPPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPIGITK
QDYEADALQRRFSGGSHSYGGESPRLSPCSSMGKLSKSDEQLSSLEQDSGQCSRNTSCET
LDITEGYDPDYDFLHQDLSSVDQIHPLSIGGCLSPLPESHRESSSSSCPPLFHSPVGSPY
GASPPLQPPPLQSRVSAPPALPQKKRRSGALPTHASSLDGTGSPRALFERLPSQYDNISE
EELLALRASPGPPVPPFPVYAPVSPAPPFLYGSTPLHFSPSQSADIPQSPPPLPEKKSRH
ILKYMQFVEDYSEPQPSVFYQMPQSESIYEQRNKRFQEVYGFNDSFSSSDSMHDPLPPPA
LPPKQRQLASLSASPSSSSSSSLSSQLPAAQAGSLAAEGDDAAAAAAVNLSLSASNSSLT
APTSLDLAAPATPSQDLLLLANGSLESCAGSLATCLPSDASLSETCQPSLSESAKEEGGE
GEYVNLYSSTQANGDVTRPRRDPTPGAEDPTSDKDMADSESWRKSPDSGQSIEELDELSL
IDHEEIMSRITLKQETDDGPDVRAGSGDILLVHATETDRKDLVLYCEAFLTTYRTFITPE
DLIKKLHYRYTRFSHSPDTFKKRVSKNTFFVLVRVVDELCLVEMTEDILRQLMDLVFRLV
CSGELSLARVLRKNILDKVEQKKLMRYTMSLQPLAARGVAARPGTLHDFRSHEIADQLTL
LDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIILQEKAQDREKLL
LKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEYCTLIDSSSSFRAY
RAALAEVEPPCIPYLGLILQDLTFVHLGNPDLIHEKVNFSKRWQQFNILDSMRRFQQVHY
DLKHNEEIVSFFNDFSDHLAEEALWELSLKIKPRNIVRRKTDREEKT
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaaagatagaaagtaagcaagattcccagcgttcccatttgtcttccttcacc
atgaaacttaaggacaagttccactcgcccaaaatcaagaggacgccgtccaagaagaca
tccaagcccccggcagagaacactgtgaagaccccagagaagcacgtcaacaagaacctg
agtcgccttgaagagcatgagaaagacgtggtcagtgccttgcgttacttcaagaccatc
atcgacaagatggtggtggacaagaaggttctagagatgttacccggttctgccagcaag
gttctagaggccgttctgcccctggttcaggtggacccaaggatacagcacagctcggcc
gtgtcgtcgtgtctgaaccgggtctaccagagcctggggaacctcatccgctggtccgac
caggtcatgctcggagatgatgacatcaacctggacgacaaggagaccatcctgtccgtc
accacggtgataagagccgtgctggatggagtgaaggagctagtgaagttgaccatcgag
aagcaagagcacccctcccctacctcccccgtcaagcctgtgccccccgtgaccatccag
gacagcacaccggagcctcccgcagaggaggccgatggagagaaggagaaggagagagag
agggatgcaccgaccaacgcctccaccacggcccactccaccgagatccttaccgactcc
acggatgaggaggtggcccccccgaaaccccccctcccagggctaaaggttccagagcac
tgtcctcctgccctcccgcccaagaagcgccagtccgccccgtcccctacacgtgtggca
gtggtggcgcccatgagtcgagccaccagcggctccagtcttcccattggcatcacaaaa
caggactacgaggcggatgcgctgcagaggcgcttctccggcggcagtcactcttacggg
ggcgagtccccgcgtctctccccctgcagcagcatgggcaaactcagcaagtcagacgag
cagctctcctccttagagcaggacagcggacagtgctcacgcaacaccagctgtgagacg
ctggatataactgaggggtacgatccagactacgacttcctgcaccaggacctctccagt
gtagatcagatccatcccctctccataggggggtgcttgagccccctccccgaatcccac
cgcgagtcctcctcctcctcctgcccccccctcttccactccccggtgggctctccgtac
ggggcgtccccccccctccagccgcccccgctccagtcccgcgtcagcgcccccccggcc
ctcccccagaagaagcggcgcagcggggcgctgcccacccatgcctcgtcgctggacggg
acggggtcgccgcgggccctcttcgagcggctgccctcgcagtacgacaacatcagcgag
gaggagctcctagccctccgtgccagccccggcccccccgtgccccccttccccgtctac
gcgcccgtctcgccggccccgcccttcctctacggctccaccccacttcacttcagcccc
agccagagcgcagacatcccacagagcccaccgcccctgcccgagaagaagagccgacac
atcctgaagtacatgcagtttgtggaggactactctgagccccagccgtcggtcttctac
cagatgccccagagcgagagcatctatgagcagcgcaacaagcgcttccaggaggtgtac
ggcttcaacgactccttcagcagcagcgactccatgcacgaccccctgccaccccccgcc
ctgcctcccaaacagaggcaactggcgtccctctccgcctctccctcctcctcctcctct
tcgtctctgtcgagtcagctcccggcggctcaggctggctctctggccgcggagggagat
gacgcagccgccgccgccgccgtcaatctcagcctctccgcctctaactcctccctcact
gcgcccacgagcttggacttggcagccccggccacgcccagccaagacctgctgctattg
gctaacggctctctggagagctgcgctggttctctggctacctgtctgccctctgacgct
tctctctctgaaacatgccagccctctctgagcgagagcgctaaggaagaggggggcgag
ggcgagtatgtcaatctgtactcctccacccaggccaacggagacgtgacacgcccccgc
cgcgacccgacccccggagctgaggacccgacgtcagacaaggacatggcggattcagag
agctggaggaagtctccagactcaggccagagcatagaggagctggatgagctctccctc
atcgaccacgaggagatcatgtcccgcataacactaaagcaggagactgacgatgggccg
gacgtgagggctggatcaggtgatattctgttggtccacgcaacagaaaccgaccgcaaa
gatctggtgctgtattgtgaagcgttcctgaccacgtaccgtacgttcataaccccagag
gacctcattaagaagctccactatcgatacaccaggttctcccacagtccggacacgttt
aagaagcgcgtcagtaagaacaccttcttcgtgctggtgcgtgtggtggacgagctctgt
ttagtggagatgacggaggatatcctgaggcagttgatggacctggtgttccggctggtg
tgcagcggggagctgagtctcgcacgggttctccgcaagaacattctggacaaagtggaa
cagaagaagttgatgcgctataccatgtcactgcagccactggccgctagaggggtggcc
gcaaggccgggcacactccatgacttccgcagtcatgagattgctgaccagctcactctc
cttgacgctgagctcttctacaagatagagatcccagaggtgttgctttgggcaaaggag
cagaatgaggagaaaagccccaatctcacacagttcacagagcactttaacaacatgtcc
tactgggtccgctccataatcatcctccaggagaaagcccaggacagggagaaactactc
ctcaaattcatcaaaatcatgaagcacttacggaagctgaataactttaactcgtatctt
gcaatactctctgcgctggattctgcacccattcggagactggaatggcagaaacaaacc
tcagagggactggaggagtactgcactttaattgacagctcctcttcgttccgtgcgtat
cgggcagcactggctgaagtggagcctccctgcatcccctatctgggtctcatcctccag
gacttgacctttgtgcatctgggaaaccctgacctcattcacgagaaggtgaacttctcc
aaacgctggcagcagttcaacatcctggacagcatgaggcgctttcagcaagtgcattat
gatctcaaacacaatgaagaaatcgtctccttcttcaacgacttcagcgaccacctggca
gaggaggctctgtgggagctgtctctgaagatcaagccacgcaacatcgtgcgacgcaag
accgaccgcgaggagaaaacctag
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