Clupea harengus (Atlantic herring): 105891624
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Entry
105891624 CDS
T09045
Symbol
ctu1
Name
(RefSeq) cytoplasmic tRNA 2-thiolation protein 1
KO
K14168
cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
105891624 (ctu1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
char03016
]
105891624 (ctu1)
Transfer RNA biogenesis [BR:
char03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
105891624 (ctu1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zn-ribbon_14
ATP_bind_3
tRNA_Me_trans
RecR_ZnF
Motif
Other DBs
NCBI-GeneID:
105891624
NCBI-ProteinID:
XP_012673257
Ensembl:
ENSCHAG00000016772
UniProt:
A0A6P3VIP3
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Position
7:22102688..22105643
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AA seq
343 aa
AA seq
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MPVFCSSCENKRAVLKRPKTAHSLCKECFFWAFEEEVHHTIITARLFNRGETVGIGASGG
KDSTVLAHVMKVLNERFDYGLKLLLLSVDEGITGYRDDSLETVKRNQQQYDLPLKIVSYE
ELYGWTMDAIVKQVGLKNNCTFCGVFRRQALDRGAMMLKVDKICTGHNADDIAETVLMNV
LRGDIARLRRCTAISTASEGEGVIPRCKPLKYAYEKEIVLYAYFKKLDYFSTECIYSPNA
YRGHARAFLKDLEAVRPSSIMDVIHSGENLSVREGVRMPVQGTCSRCGYISSQALCKACV
LLEGLNRGLPRLGIGKHHRLHGKILAQQPLTEREERKLRAVDF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgttctgcagcagctgtgaaaataagagagcggtgctgaaacgcccgaagact
gcacattcgctctgcaaggaatgtttcttctgggcgtttgaagaggaggtccatcatacc
atcataactgcgcgtcttttcaaccgcggtgagacagtgggcatcggagcgtcaggcggc
aaggactccactgtgctggctcatgtgatgaaggtactcaacgaacgcttcgactacggc
ctcaaactcctgctgctgtctgtggacgagggcatcacaggctaccgtgacgactccttg
gagacggtgaagaggaaccagcagcagtatgacctgccgctgaagatcgtgtcctacgag
gagctatatggctggaccatggacgccatcgtgaagcaggtgggactgaagaacaactgc
acgttctgcggggtcttcagacgacaggccctggacaggggagcgatgatgctgaaggtg
gacaagatatgcacaggccacaatgcggacgacatcgccgagacggtcctgatgaacgtg
ctccgcggcgacatcgcccgtctgcgccgctgcacggccatcagtacggcgagcgagggc
gagggagtgatcccgcgctgcaagccgctcaagtacgcctacgagaaggagatcgtgctc
tacgcctacttcaagaagctcgactacttctccaccgagtgcatctactcgcccaacgcc
taccgcggccacgcgcgcgccttcctgaaggacctggaagcggtgcggcccagctccatc
atggacgtcatccactcgggcgagaacctgtcggtgcgggagggcgtgcggatgcccgtg
cagggcacctgttcccgctgcggctacatctccagccaggcgctctgcaaggcctgcgtg
ctcctggaggggctgaaccgcggcctgccgcgcctcggcatcggcaaacaccaccggctc
cacggcaagattctggcccagcagcccctcaccgagcgggaggagcgcaagctgcgggcc
gtggacttctga
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