Clupea harengus (Atlantic herring): 105891753
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Entry
105891753 CDS
T09045
Symbol
jarid2a
Name
(RefSeq) protein Jumonji
KO
K11478
protein Jumonji
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105891753 (jarid2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105891753 (jarid2a)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
105891753 (jarid2a)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
105891753 (jarid2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
zf-C5HC2
JmjN
DUF6861
Motif
Other DBs
NCBI-GeneID:
105891753
NCBI-ProteinID:
XP_031431602
Ensembl:
ENSCHAG00000007527
UniProt:
A0A6P8G7K2
LinkDB
All DBs
Position
11:complement(7109607..7150241)
Genome browser
AA seq
1334 aa
AA seq
DB search
MSRERPKRNIIQKKFDDNDGIPWSEERVVRRVLYLSLKEFKREQKSKVVGKNRHGKGVIN
GALANGHSSGSSSRSTASKGGMFTGSSKADRCRRLAPGHDGASESSEEGPARKRPRLQAQ
RKFAQSQPNSPNSTPVKMVEAMPLSPVPPPSHLSKRRPKTEDFLTFLCLRGSSALPSSMV
YFGTAQEDGDVEEEEDEEDQEQEAATSEASTSCQSTPRKHKPPGKPTANGHVFSGQGKAT
GGAKEVSLRSRGKESPQGKEKNQREQQRRSDHHARAPARSSTTTHNLRPSRAVQERLQQV
SKMNGNAQQSSTSTRKAKDPLPPPPPPPTKAVKYPKGHVTYTKARLLKEAKLHPGTRTSQ
ATNSRTNTHANTHASNTSQPPQKPNSGKAQSSQAKTVRAVLPPKANGCSRLSGKSGRRAE
AAGETTQPQPPRRNGLRQSKRRLEAATSGGASPARNGQEVGVKKVKVQTVSPETRCKKTV
AVPAEPLARDKVATETAAANNCDALAAGQQTAASQRPKRVSAGRLMFTRQAQPRPPPPQP
TTAPPPTEMPPPLPPQPTTAPPPTALPPPAEPPKPAEPKAARERERGKRGASTGAGVGAG
AGAGAGPGAGAGEGAGAEAGTGAFTGLTDVPVFELVTQEFQDPLTYMARVRERAEPFGLC
RVVPPGFWRPECKLKDEMRFVTQVQHVHKLGRRWGPNVQRLACIRKHLRMQGIAMDEPPL
IGGCELDLARFFQLINDMGGMQQVTDLKKWSRLADLLGIAKSAQDRLAKLQEAYCQYLLS
YDSLPADERAGLEQEVLADKELLERRKGPLEGQADYSQHALLLLPRSEPKNGLLNGVLHP
NGAHQGRLRELQLETGGKGCGSGGSSSSSSCSSRRRTSSQEKRERAGGEDEEEETEEQGG
VPSDQHKCIYRGKSVSLTTFFRTARNTMNMCFSKEPDAAEVEEEYWRIVEERESHVAVHC
GRVDTMTHGSGFPMGKSEPFSKHGWNLTVLPNNSGSILRHLGAVPGVTIPWLNIGMVFST
SCWSRDQNRLPYIDYLHTGADCIWYCIPAEEKTKLDKVVHTLLQANGTPGLQMLEKNIMI
SPEVLCQEGIRVHRTVQKSGQFVICFPGTYVAKVCCGYSVSETVHFATPQWTTLGYEAAK
ELKRRRIEEPFSTERLLYKMGMFESRRENKFLQSTISSLLKDLRDTEISQRRDLFKAGLR
SSARYRTLDSSQPPAEGRKKQSARLAEDTSDRRCQTCQHLCYLSMVVQESDNVVFCLECT
LHLVQKRRTSRGLKMMYRYDEEQMNSLLSRVSGRVQERSSERRRTEPPPPAPTPAQRSPR
ARNSTQAPKHTPSS
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgagcagggaaagacccaagaggaatatcattcaaaagaaatttgatgataacgatggc
atcccctggtcggaagagcgcgtggtgcgcagggtgctctacctttccctcaaagagttc
aagagagaacagaagagtaaagtggtggggaagaaccgccacggaaagggggtcattaac
ggtgctttagcaaatggccattcgagcggatcgagttccaggtcgactgcgtcaaaaggg
ggcatgttcacgggctcctccaaggcagaccggtgccggcgcctggccccgggtcacgat
ggggccagcgaatcctccgaggaggggcctgcacgcaagcggcccaggctgcaggctcag
aggaagttcgcccagtctcagcccaactcccctaactccaccccggtcaagatggtggag
gccatgccgctcagccccgtccctccacccagccacctctccaagcgccggcccaagaca
gaggacttcctcaccttcctctgtttacgaggttcttcagcgttgcccagcagcatggtt
tactttgggacggctcaggaggatggggatgtggaggaggaggaggacgaggaagatcag
gagcaggaagcagccaccagcgaggcatcaacatcctgccagtcgactccacggaaacac
aaaccgcccggcaaacccacagccaatggccacgttttcagtggccagggcaaagccaca
ggaggagcaaaggaggtgagcctccggtccagggggaaggagtctccccaggggaaggag
aagaaccagagggagcagcagcgccgctccgaccaccacgccagggccccggctcgctcc
tccaccaccacccacaacctgaggcccagcagggcggtgcaggagcggctgcagcaggtt
tctaaaatgaacgggaatgcgcagcaatcttccaccagcacgcggaaggcgaaagacccc
cttcccccgccaccgccaccgccgaccaaagctgtgaagtaccccaagggccacgtcacc
tacaccaaagcgaggttgctcaaggaggccaagctccaccccggcactcgcaccagccaa
gccaccaattcgcgcaccaacacccacgctaacacccacgccagcaacaccagccagccc
ccccagaaacccaactcaggaaaagcccagagcagccaggccaagaccgtccgagcggtg
ctacccccgaaggccaacggctgctccaggctgagcggcaagagtggcaggagagccgag
gcggccggggagacaacgcagccgcagccaccacggcgtaacggactcaggcagtccaag
agacgactggaggcggccaccagtgggggtgccagcccggccaggaatgggcaggaggtt
ggcgtcaaaaaggtcaaagtgcagacggtgtctccggagacgcggtgcaagaagactgtt
gctgttccggccgagccgctcgcccgagacaaggtcgccacagaaacggccgcagccaac
aactgtgacgcgctggcagcaggccagcagacggccgcctcccagaggcccaagcgcgtg
tcggccgggcggctgatgttcactcgccaggctcagcccagaccgccccctccacagccc
acaactgccccacctccaacggaaatgcccccgccgctccctccacagcccacaactgcc
ccacctccaacggcattgcccccgcctgccgagccccccaaaccggccgagccgaaagcg
gcccgggagagggagcggggtaagcggggtgccagtacgggcgcaggggtaggggcaggg
gcaggggcaggggcaggaccaggagcaggggcaggggaaggggcaggggcagaggcaggg
acgggggcatttaccggcctgacggacgttccggtgttcgagctggtgacgcaggagttc
caggacccgctgacgtacatggcgcgcgtgcgggagcgggccgagccgttcgggctgtgc
cgcgtggtgccgcccggcttctggaggcccgagtgcaagctgaaggacgagatgcgcttc
gtcacgcaggtgcagcacgtgcacaagctgggacgccgctggggccccaacgtgcagcga
ctcgcctgcatacgcaagcacctccgcatgcagggcatcgccatggacgagcccccactc
attgggggctgcgagctggacctggcccgcttctttcagctcatcaacgacatgggcggc
atgcagcaggtgaccgacctgaagaagtggagccgcttggccgacctgctgggcatcgcc
aagtccgcccaggaccggctggccaagctgcaggaggcctactgccagtacctgctctcc
tacgactctctgcccgcggacgagcgcgccggcctggagcaggaggtcctggccgacaag
gagctgctggagaggaggaagggccccctggagggccaggcagactactcccagcatgca
ttgctcctcctgccacgcagcgagcccaagaacggcctgctgaacggcgtcctgcacccc
aacggcgcccaccaggggaggctgagggagctgcagctggagacgggcgggaaggggtgc
ggcagcggcggcagcagcagcagcagcagctgcagcagccggcggagaacctcgtcccag
gagaagagagagagagccgggggagaagatgaagaagaggaaaccgaggaacaggggggt
gtgccaagtgaccagcataagtgcatctacagggggaaatcagtgtcccttacgacgttc
ttcaggacagctaggaacaccatgaacatgtgcttcagcaaggaacctgacgccgcggaa
gtcgaggaggagtactggaggattgtggaggaaagggaaagccatgttgcagtgcattgt
gggagagtggacacaatgacgcatgggagtggcttccctatgggcaagtctgagccattt
tcaaagcatggatggaacctcactgtccttcccaataactcaggatccatcttacgccac
ctcggtgctgtgcctggagtgaccattccctggctgaacattggcatggtcttttctacc
tcatgttggtctcgggaccagaaccgccttccatacatagattatctacacactggtgct
gactgtatttggtactgtattcccgctgaggagaagacaaaacttgacaaagtagttcac
acactgctgcaggctaatggaactccaggactgcagatgctggagaagaatattatgatc
tcccccgaggttttgtgtcaagagggcatccgagttcaccgcacggtccagaagagcggc
cagttcgtgatctgcttcccagggacgtacgtggccaaggtgtgctgcgggtacagcgtg
tctgagacggtgcactttgccaccccccagtggacgacgctgggctacgaggctgctaag
gagctgaagcggcgtcgaatcgaggagccattttccacagagaggctgctttacaagatg
ggcatgttcgagtctagacgggagaacaaatttttgcagagtacaatctcctcacttctc
aaagatctcagggacacagagattagccaacggcgggatctgttcaaggctgggctgcgg
tcgtctgcgcgctaccggacgctggacagcagccaaccccctgcggagggccggaagaag
cagagcgcgcggttggccgaggacacctcggaccggcgctgccaaacatgccagcacctg
tgctacctatccatggtggtccaggagagtgacaacgtcgtcttctgtctggagtgcacc
ctgcatctggttcagaagcggcggacctccaggggtctaaagatgatgtaccgctacgac
gaggagcagatgaacagcttgctaagccgtgtgagtgggagggtgcaggagaggagcagc
gagaggcgaaggaccgagcccccgcccccggcccccacaccagcacagcgcagcccccgc
gccaggaactccacccaggcccccaaacacacccccagctcctga
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