Clupea harengus (Atlantic herring): 105891787
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Entry
105891787 CDS
T09045
Symbol
abcb4
Name
(RefSeq) ATP-binding cassette, sub-family B (MDR/TAP), member 4 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105891787 (abcb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
105891787 (abcb4)
04147 Exosome [BR:
char04147
]
105891787 (abcb4)
04090 CD molecules [BR:
char04090
]
105891787 (abcb4)
Enzymes [BR:
char01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
105891787 (abcb4)
Transporters [BR:
char02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
105891787 (abcb4)
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105891787 (abcb4)
CD molecules [BR:
char04090
]
Proteins
105891787 (abcb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
Zeta_toxin
Rad17
AAA_16
RsgA_GTPase
AAA_28
G-alpha
AAA_30
PRK
AAA_29
AAA_7
Motif
Other DBs
NCBI-GeneID:
105891787
NCBI-ProteinID:
XP_031432463
Ensembl:
ENSCHAG00000004048
UniProt:
A0A6P8G034
LinkDB
All DBs
Position
11:complement(8229720..8249116)
Genome browser
AA seq
1290 aa
AA seq
DB search
MTKFGSRAQRSITMGKESREDKPQGKVKGDQNGDISEKKEEKPEKMEMVGTFEIFRFASS
VDILFMVVGTVMALANGAVLPAMVIVFGDMTDSFVGDASLPPNITLPPNFTIPQQSNETL
GEQMTRHAIYYSIMGGIVLIAAYVQVAFWTLAAGRQVKRLRKKFFHAIIQQEIGWFDVNE
TGQLNTRLADDIYKINEGIGDKLGLLIQSVSTFLTGFVIGFIKGWKLTLVILSISPLLGI
SAAIIAKVMTSFTSKEQTAYAKAGAVAEEVLSAVRTVFAFGGQKKEIDRYNKNLVRAKDV
GIKKAITVNIAVGFTYAMVYMSYALAFWYGSTLIIAGEYTIGSVLTVFFAVIIGAFGIGQ
TSPNIQAFASARGAAHKVFGIIDNKPNIDSMSDEGYKPDHIKGNIEFKNIHFSYPSRTDV
KVLNNMSLKVNSGQTIALVGSSGCGKSTTVQLLQRFYDPQEGSVCIDGHDIRSLNVRYLR
GLIGVVSQEPVLFATTIAENIRYGREEVTQAEIEQATREANAYDFIMKLPNKFETLVGDR
GTQMSGGQKQRIAIARALVRNPKILLLDEATSALDAESETIVQAALDKVRQGRTTIVVAH
RLSTIRNADVIAGFQKGEIAELGTHSELMEKQGVYHSLVTMQTFKSVEKSDEQADIEVRD
ARSPSVNSLSEPSLVRQKSKEGSFIHLEKDPQANDKDAEEEEKVPEVTFLQVLKWNLPEW
PYMVVGVICAIINGAMQPAFAIIFAKIIAVFAEPDTAVVRQKADLYSLLFAAIGVVSFIT
LFLQGYCFGKAGEILTMRLRLSAFKAMMRQDLGWYDDSKNSVGALTTRLATDTAQVQGAT
GLRMATLAQNVANLGTSIIISFVYGWQLTLLILTVVPIMAVAGAIQMKMLGGHAVKDKKE
LEKAGKIATEAIDNIRTVVSLTRENKFEALYQENLVVPYKNSVKKAHVFGFTFSFSQAMI
YFAYAGCFKLGSWLIEQGQMTFEGVFLVISAVIYGAMAVGEANSFTPNYAKAKMSASHIK
MLVDKEPAIDNSSEEGEQPDNFEGNVTFEDVHFNYPSRPDVTVLKGLRLRARKGQTIALV
GSSGCGKSTTIQLLERFYDPMHGTVRLDENDSRQLNIHWLRAQMGIVSQEPVLFDCSLAE
NIAYGDNSRVVAQEEIEQAAKAANIHSFIEGLPEKYQTQAGDKGTQLSGGQKQRIAIARA
IVRNPKLLLLDEATSALDTESEKIVQEALDKAREGRTCIVVAHRLSTIQNADCIAVFQNG
VVVEKGTHQQLLGKQGVYYHLVTSQMGHKQ
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaatttggatcgagggcgcaacgttcgatcaccatggggaaagaatcaagggaa
gacaaacctcaggggaaagttaaaggcgatcaaaatggagacataagtgagaaaaaagaa
gagaaaccagagaagatggagatggttggcaccttcgaaatattccgtttcgccagtagt
gtggacatactgttcatggttgttggcacagttatggcacttgccaatggagctgtcctt
cctgccatggtaatcgtgttcggagacatgacagacagttttgtgggtgatgcgtcgcta
ccaccaaatattaccctcccccccaatttcacaattccacaacagtctaatgagactcta
ggggaacagatgaccaggcatgccatatactacagcatcatgggaggtatagttctgata
gctgcatacgttcaagtggctttctggacattggcagctggacggcaagtgaagagactg
cgaaagaagttcttccatgccatcattcagcaggagatcggctggtttgacgtcaatgaa
acaggccagctcaacacacgccttgccgatgacatatacaagataaacgagggcattggt
gacaaactggggctactcatccagtctgtctccaccttcctcactggcttcgtcatcggc
ttcatcaaaggctggaagctcaccctcgtcatcctctccatcagcccgctgctcggaata
tcggcagccatcattgcaaaggtgatgacatcgttcacctctaaagaacaaacagcctat
gctaaggcaggagcagtagcagaagaggtgctgtcagcagtcagaactgtcttcgcgttt
ggtgggcaaaagaaagagattgacagatacaacaagaacctggtgagggcaaaagacgtg
gggataaaaaaggccatcactgtgaacattgctgtgggcttcacctacgccatggtgtac
atgtcctacgctctggccttctggtacggcagcacgctcatcatcgcgggagagtacacc
atcggatctgtgctgacggtgttctttgctgtcatcatcggtgctttcggcattggtcag
acctcccccaacatccaggcctttgctagtgctcgaggcgctgcacataaagtgtttggc
atcatcgataacaaacccaacatcgacagcatgtcggatgagggctacaagccagaccac
atcaaaggaaacattgagttcaagaacatccacttcagctacccctcacgaacggacgtc
aaagtgttaaacaacatgagcctgaaggtcaatagtggtcagacgatcgcgctggtgggg
agcagtggctgtggaaagagcaccacggtgcagctgctgcagcgcttctacgaccctcag
gaaggatctgtgtgtatcgatggccacgacatccgatcgctgaacgtgcgctaccttcga
gggctgataggcgtggtgagccaagagcccgtgctgtttgccaccaccatcgccgagaac
atccgctacggccgagaagaggtcacgcaagctgagatcgagcaggccacacgagaggcc
aacgcctacgatttcatcatgaaactgcccaataaattcgagacgctggtaggagaccga
ggcacacagatgagtggaggacagaagcagaggatcgccatcgctcgggccctggtgcgc
aatcccaagatcctcctgctggatgaggcaacatctgccctcgacgctgagagcgagacg
atcgtgcaggctgccctggacaaagtaaggcagggccggaccaccatcgttgtggctcat
cgtctctccaccatccgtaatgccgacgtgatcgcgggcttccagaagggagagattgca
gagctgggaacacactcagagctgatggagaagcagggagtctaccacagcctggtgacc
atgcagacgttcaagagtgtggagaagtcagacgagcaggcagacatagaggtgagggac
gccaggagtccctcagtcaactccctgagtgagccctccctcgtcaggcagaagtcaaaa
gaaggctccttcatccacttggagaaagacccacaggccaacgacaaggatgccgaggag
gaggagaaggtgcctgaggtgaccttcctgcaggtgctgaaatggaatcttccggaatgg
ccctacatggtggtgggggtcatctgtgccatcatcaatggagccatgcagcctgccttc
gccatcatcttcgccaaaatcatcgccgtgtttgccgagcctgacacagctgtcgtgagg
cagaaggcggatctgtactctctgctgtttgctgccattggtgtcgtgtccttcatcacc
ctcttcctgcagggatactgctttggcaaagctggagagatcctcaccatgagactgaga
ctgagcgccttcaaggccatgatgagacaggatttgggctggtatgatgactcgaagaac
agcgtgggcgctttgaccaccaggctggcaacagacacggctcaagtccagggtgctaca
gggctgcgaatggcaacgctggcacagaacgtcgccaacctgggcacctccatcatcatc
tcgtttgtctacggctggcagctcaccctcctcatcctcaccgtggtgccaatcatggcg
gttgccggggcgatccagatgaagatgctgggtggccatgcggttaaggacaagaaggag
ctggagaaggctggaaagatcgctactgaggccatagataacatccgcacagtggtgtcc
ctaacgcgggaaaataagtttgaggctctctatcaggagaaccttgttgtcccatacaag
aactctgtgaagaaggcccatgtttttgggttcaccttctccttctcccaggccatgatc
tactttgcctacgccggctgcttcaaattgggttcctggctcatcgagcagggtcagatg
acctttgagggagtcttcctggtcatctcagctgtgatatacggagccatggcagtagga
gaggcaaactctttcacacccaactatgctaaagccaaaatgtctgcctcgcacatcaag
atgctcgtcgataaggagcctgccatcgacaactcctcggaggaaggggagcaaccggat
aactttgagggcaacgtgacttttgaggacgtgcacttcaactacccatcccggccggac
gtgacggtgctgaagggtctgcgtctgcgggcacgtaagggccaaaccatcgctctggtg
ggcagcagtggctgcggcaagagcaccactatccaactcctggagcgcttctatgaccca
atgcacggcacagtgaggttagacgagaacgactcgcgccagctcaacatccactggctg
cgcgctcagatgggcatcgtgtcccaggagcccgtcctgttcgactgcagcctggccgag
aacatcgcttacggcgacaacagccgcgtcgtcgcacaggaggagattgagcaagcagcc
aaggctgcaaacatacactccttcatagaggggctgccagagaagtaccagacacaagca
ggggataagggaactcagttgtcggggggtcaaaagcagcgcattgccatcgccagggcg
atcgtccgcaaccccaaactactgctgctggatgaggccacatctgcactggacacggag
agcgagaagatagtgcaggaggcgctggacaaggcccgcgagggtcgcacgtgcatcgtg
gtggcccaccgcctctccaccatccagaacgccgactgcattgccgtgttccagaatggc
gttgtcgtggagaagggcacacaccagcagctgctcggcaagcagggtgtttactaccat
ctggtcacctcccagatgggacataaacagtga
DBGET
integrated database retrieval system
