Clupea harengus (Atlantic herring): 105891856
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Entry
105891856 CDS
T09045
Symbol
sv2a
Name
(RefSeq) synaptic vesicle glycoprotein 2A isoform X2
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105891856 (sv2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
105891856 (sv2a)
Transporters [BR:
char02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
105891856 (sv2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LD_SV2
MFS_1
Sugar_tr
MFS_2
Pentapeptide_4
Motif
Other DBs
NCBI-GeneID:
105891856
NCBI-ProteinID:
XP_012673490
Ensembl:
ENSCHAG00000009146
UniProt:
A0A6P3VJX8
LinkDB
All DBs
Position
11:complement(6189057..6225072)
Genome browser
AA seq
729 aa
AA seq
DB search
MEEGYRDRTAFIKGAKDIAKEVKRQAGKKVGRGADKMSDEYTKRSYARFEEEDDDEDYPV
QAQDGTYYRSNSRANDEEGHSDSTEGHDEDDEIYEGEYQGIPRGETAAKSDAEAQAAGQF
RDLAQLEAERRKDQEELAQQYETILQECGHGRFQWSLYFVLGLALMADGVEIFVVGFVLP
SAERDMCLSEPNKGMLGLIVYLGMMVGAFVWGGLADRIGRRQTLLISLSINSVFAFFSSF
VQGYSSFLFCRLLSGVGIGGSIPIVFSYYSEFLAQEKRGEHLSWLCMFWMFGGIYAAAMA
WAIIPHYGWSFQMGSAYQFHSWRVFVLVCAFPAVAAIAALNTMPESPRFYLENGKHDEGW
MILKQVHDTNMRAKGYPERVFSVTTIKTVKQMDELVDMGDSAAWHQKWRMKLSNLFHQVW
SNFLTIFNPEFRRTTYMMMAVWFSMSFSYYGLTVWFPDMIKYLQKEEYAARTKVFIKEKV
EHVTFNFTLENQVHRNGEFFNNKFLNLKMKSMVFEDSMFEECYFEDITSSNTFFRNCTFI
STLFYNTDLFKFRLVNSKLINSTFLHNKEGCLLDFSDDNNAYMIYFVSFLGTLAVLPGNI
VSALLMDKIGRLRMLAGSSVISCVSCFFLSFGNSESAMIALLCLFGGISIASWNALDVLT
VELYPSDKRCTAFGFLNALCKLAAVLGISIFQSFVGITKAVPILFASGALAAGSFLALKL
PETRGMVLQ
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggaggagggatacagagaccggacggccttcataaaaggtgccaaagacattgccaaa
gaggtgaagcgccaggcgggcaagaaggtgggccggggcgcggacaagatgtccgacgag
tacaccaagcgctcgtacgcgcgctttgaagaagaagatgacgacgaagactaccccgtg
caggcgcaggacggcacgtactaccgcagcaacagccgcgcaaacgacgaggagggccac
agcgactcgaccgagggccacgacgaggacgacgagatctacgagggcgagtaccagggc
atcccgcgtggcgagaccgcggccaagtccgacgcggaggcgcaggccgcgggccagttc
cgggacctggcgcagctagaggccgaacggcgcaaggaccaggaggagctggcccagcag
tacgagaccatcctgcaggagtgcggccacgggcgcttccagtggtcactctatttcgtg
ctgggcctggcgctcatggccgacggcgtggagatcttcgtggtgggcttcgtgctgccg
agtgccgagagggacatgtgtctgtcggaacccaacaagggcatgctgggcctgattgtg
tacttgggcatgatggtgggtgccttcgtgtggggaggccttgcggacaggatcggcagg
cggcagactctcctcatctctctctccatcaacagcgtgtttgccttcttctcctccttc
gtgcaaggctacagctcgttcctcttctgccgcctcctctctggcgtgggtattggaggt
tccatccccatcgtgttctcctactactcggagttcctggcccaggagaagagaggcgag
catctgagctggctctgcatgttctggatgtttgggggcatctacgctgctgccatggcc
tgggccatcatccctcactatggctggagtttccagatgggctcggcataccagttccac
agctggcgtgtgtttgttctggtgtgtgccttccccgctgtggctgccatagcagccctc
aataccatgcccgagagccctcgcttctacctggagaatgggaagcatgatgaaggctgg
atgatcctcaagcaggtccatgataccaacatgagggccaagggctaccctgagagagtc
ttctctgtcactaccatcaaaactgtgaagcagatggatgagctggtggacatgggagat
tcagccgcctggcaccagaagtggaggatgaagctgagcaatctcttccatcaggtgtgg
agcaatttcctgaccatcttcaaccccgagttccgccgcaccacctacatgatgatggcc
gtgtggttctccatgtccttcagctactatgggttgactgtgtggttccctgacatgatc
aagtaccttcagaaggaggagtacgccgcacgcaccaaagtcttcatcaaggagaaggtg
gagcatgtcactttcaatttcactctggagaaccaggtgcaccgcaacggcgagttcttc
aacaacaagttcttaaacctaaagatgaaatccatggtgtttgaagattccatgtttgag
gaatgctactttgaggacatcacctccagcaacaccttcttcaggaactgcacattcatc
tccaccctcttctacaacacagatctcttcaagttccgcctggtcaacagcaagctcatc
aacagcactttcctgcacaataaagagggctgcttgctggatttcagcgacgacaacaat
gcctacatgatctacttcgtcagcttcctgggcaccctggccgtgctgcccgggaacatc
gtatcggctctgctcatggataagattggacgcctgaggatgctggcgggctccagcgtg
atctcctgtgtcagctgcttcttcctgtcctttggaaacagcgagtcggccatgatcgcc
ctgctctgtctcttcggaggcatcagcatcgcctcctggaatgccctggatgtgctcaca
gtagagctttatccgtcggacaaaagatgcacagccttcgggttcctgaacgcgttgtgc
aagctagcggctgttttaggtataagtatcttccagtcgttcgtgggcatcaccaaagcg
gtgcccatactcttcgcctctggtgccctcgccgccggcagcttcctggcgctcaagctg
cccgaaacgcggggcatggtgctgcagtag
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