Clupea harengus (Atlantic herring): 105891919
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Entry
105891919 CDS
T09045
Symbol
psmc4
Name
(RefSeq) 26S proteasome regulatory subunit 6B isoform X1
KO
K03063
26S proteasome regulatory subunit T3
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
105891919 (psmc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
char03051
]
105891919 (psmc4)
Proteasome [BR:
char03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
105891919 (psmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_5
AAA_2
AAA_lid_3
AAA_16
RuvB_N
AAA_22
nSTAND3
DUF815
NPHP3_N
AAA_28
RNA_helicase
AAA_14
Mg_chelatase
TIP49
NTPase_1
TsaE
ATPase_2
NACHT
AAA_3
AAA_lid_PRS2_C
AAA_7
AAA_33
NB-ARC
Parvo_NS1
AAA_17
IstB_IS21
AAA_25
AAA_24
ABC_tran
AAA_18
DUF3450
Motif
Other DBs
NCBI-GeneID:
105891919
NCBI-ProteinID:
XP_012673578
Ensembl:
ENSCHAG00000016362
UniProt:
A0A6P3VJ25
LinkDB
All DBs
Position
11:7799539..7811381
Genome browser
AA seq
437 aa
AA seq
DB search
MKRVCVEHNVITSTVTKFNMEDGGVIVEKPQDDITGMISSRPQTGLSFLAPEPEDLEDLY
SRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTA
IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD
VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH
HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA
DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK
RLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSITQEAGMLAVRENRYIVLAKDFEK
AYKTVIKKDEQEHEFYK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgtttgcgtagaacacaacgtcatcacgtcaactgtgacaaaattcaacatg
gaggacggtggtgttatagttgagaaaccgcaggacgacattactggcatgattagctca
aggccccagacgggcctctccttcctggccccagaaccagaagacctggaagacctctac
agcagatacaagaaattgcagcaagagttggagtttctggaggtgcaggaagaatacatt
aaagatgaacagaagaaccttaagaaggagtttcttcatgcccaagaggaggtgaaaagg
atccagagcatcccccttgtcattggacagttccttgaggctgtggaccagaacactgct
attgtgggttccactacaggctccaactactatgtgcgtatcctcagcaccatagaccgt
gagctgctgaagcccaatgcctcagtggcacttcacaagcacagcaatgcccttgtggac
gtgctgccccctgaggcagacagcagcatcatgatgctcacttctgaccagaaacctgat
gtgatgtatgcagacattggaggcatggacatccagaagcaagaagtgagggaggcagtg
gagctgcccctaacacattttgaactctacaaacagattggtattgatcctcccagagga
gtgctgatgtatggtccccctggctgtgggaagactatgcttgccaaggctgtggctcac
cacactacagcggcgttcatccgtgtggtgggctcagagtttgtccagaagtacctgggg
gagggtcctcgcatggtgcgtgatgtcttccgactggccaaagagaacgcccccgccatt
attttcattgacgagatcgacgccattgccactaagcgctttgatgctcagactggcgct
gacagggaggtgcagcgtattctgctggagctgcttaatcagatggacggttttgaccag
aacgtcaatgtgaaggtcatcatggccactaacagagcagacactctggatcctgccctg
ctgcgtccaggtcgtctggacaggaagatcgagtttcccctcccagacaggcgtcagaag
cgtctgatcttctccaccatcacaagcaagatgaacctctctgaggaggtggatctggag
gactatgtggctcgaccagacaagatctccggtgcagatatcaattccatcacccaggag
gctggcatgctagccgtacgtgagaacagatacattgtcctggccaaggactttgagaaa
gcgtacaaaacggtcatcaagaaggatgagcaggagcacgagttttacaagtag
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