Clupea harengus (Atlantic herring): 105891920
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Entry
105891920 CDS
T09045
Symbol
scn1ba
Name
(RefSeq) sodium channel, voltage-gated, type I, beta a
KO
K04845
voltage-gated sodium channel type I beta
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04261
Adrenergic signaling in cardiomyocytes
char04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
105891920 (scn1ba)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
105891920 (scn1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105891920 (scn1ba)
Ion channels [BR:
char04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
105891920 (scn1ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
ig
Ig_3
Izumo-Ig
VEGFR1-3_N_Ig-like
YCR043C
Motif
Other DBs
NCBI-GeneID:
105891920
NCBI-ProteinID:
XP_031431928
Ensembl:
ENSCHAG00000016344
UniProt:
A0A6P8FVG9
LinkDB
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Position
11:complement(7780332..7794272)
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AA seq
224 aa
AA seq
DB search
MMSALRILLVPFALCTLLAHLSHAACVEVNSDTEAVAGRGFKLGCISCKMRGEVQATATV
DWYFKAKGEINFTHIYTYDDPANPTDIRDDRFFDRLDWNGSKNTLDVQDGSIYILNVTFN
DTGTYRCFFNRVLSFPNYEFHTNITKSVEMKVVPRATRSIASIFSEIMMYVSIIGLQVWL
VVEMVYCYRKIAAAGEEALRESAAEYLAIASESKDNCAGVQVEE
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgcactgcggattctgctggtccccttcgctctctgtactttgcttgcccat
cttagccatgcggcctgcgtggaggtgaactcggacacggaggcggtggctggccggggg
ttcaagctgggctgcatctcctgcaagatgagaggcgaggtgcaggccacggccaccgtg
gactggtacttcaaggccaagggggagatcaatttcacccacatctacacctacgatgac
cctgccaacccgactgacatccgcgacgatcgcttctttgatcgcctggactggaacggc
agcaagaacacgttagacgtgcaggacggttccatctacatcctcaacgtcaccttcaac
gacacaggcacctaccgctgtttcttcaaccgcgtactctccttccccaactacgagttc
cacaccaacatcaccaagtctgtcgagatgaaggtggtgcccagggccacccgaagcatc
gcctccatcttctcggagataatgatgtacgtatcgatcatcggcctacaggtgtggctg
gtggttgagatggtgtactgttaccgcaagatagcggcagccggagaggaggctttgaga
gagagcgcggcggagtacttagccatagcctcagagagtaaagataactgtgcaggtgtt
caagtggaagaataa
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