KEGG   Clupea harengus (Atlantic herring): 105891932
Entry
105891932         CDS       T09045                                 
Symbol
rab13
Name
(RefSeq) ras-related protein Rab-13
  KO
K06109  Ras-related protein Rab-13
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04530  Tight junction
Brite
KEGG Orthology (KO) [BR:char00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    105891932 (rab13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:char04131]
    105891932 (rab13)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:char04147]
    105891932 (rab13)
   04031 GTP-binding proteins [BR:char04031]
    105891932 (rab13)
Membrane trafficking [BR:char04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    105891932 (rab13)
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   105891932 (rab13)
  Exosomal proteins of colorectal cancer cells
   105891932 (rab13)
GTP-binding proteins [BR:char04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab8/10/13 [OT]
    105891932 (rab13)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA SRPRB MMR_HSR1 PduV-EutP RsgA_GTPase Septin AAA_7 AAA AAA_16 AAA_22 TniB
Other DBs
NCBI-GeneID: 105891932
NCBI-ProteinID: XP_012673596
Ensembl: ENSCHAG00000019770
UniProt: A0A6P3VJH8
LinkDB
Position
11:9119107..9126111
AA seq 202 aa
MAKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIDVDGKKVKLQ
VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSYENIQNWMKSIKENASAGVSRMLLG
NKCDIEAKRKVSKEVGEKLAKDHGIRFFETSAKASINVEESFLSLARDILLKSSKKPGPT
GREVKLTTPEAKTKSSSKCLLI
NT seq 609 nt   +upstreamnt  +downstreamnt
atggcgaagaaatacgacttcctctttaaattattactcataggagatagtggagttggg
aaaacctgcctcatcatccgatttgctgaagataatttcaattcaacatacatatcgaca
atcggcattgacttcaaagtaaagaccatagatgtggatggaaaaaaagtcaaactgcaa
gtgtgggacacagcgggacaagagaggtttaagaccataaccacagcctactacagagga
gcgatgggcatcatcctggtctatgacatcactgacgagaaatcttacgagaacattcag
aactggatgaagagcatcaaagagaatgcatcagcaggggtgagccgcatgctgctgggc
aacaagtgtgatattgaggccaagcggaaggtgtccaaggaagtgggcgaaaaactggcg
aaggatcatgggattcggttctttgagacaagtgccaaggccagcattaatgtggaggag
tcctttctttcactggctcgtgacattttgctgaagtcaagcaagaaaccgggaccaaca
ggaagggaggtgaagttgacaacgccagaagccaaaaccaagtcctcctccaagtgccta
ctcatttaa

DBGET integrated database retrieval system