Clupea harengus (Atlantic herring): 105891985
Help
Entry
105891985 CDS
T09045
Name
(RefSeq) glutamate receptor ionotropic, kainate 5
KO
K05205
glutamate receptor, ionotropic kainate 5
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04080
Neuroactive ligand-receptor interaction
char04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105891985
04082 Neuroactive ligand signaling
105891985
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105891985
Ion channels [BR:
char04040
]
Ligand-gated channels
Glutamate (ionotropic)
105891985
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
105891985
NCBI-ProteinID:
XP_031441832
Ensembl:
ENSCHAG00000026252
UniProt:
A0A6P8H2C0
LinkDB
All DBs
Position
19
Genome browser
AA seq
1083 aa
AA seq
DB search
MPALPALLLSIHFLFLLLTMAPHSFSQAPAMSAVKMAAILDDQSVCGRGERLALALAREN
INSMMEGPARARVEVDIFELQSDSQYETTDTMCQILPKGVVSVIGPASSPASGSTVSHIC
GEKEIPHVKIGPEETPRLPYLRFASVSLYPSNEDLSLAIGSILRSFSYPTASLICAKAEC
LLRLEELVRRFLISRETLSVRMLDDSLDPTPLLKEIRDDKVATIIIDANASISYLILRKA
SELGMTSAFYKYILTTMDFPLLRLDDVVDDQSNIVGFSMLNSSHPFYLEFIRSLNLSWRE
GCDLSPYPGPALSSALMFDAVHVVVGAVRELNRSQEIGVKPLSCTSPLIWQHGTSLMNYL
RMVEYDGLTGRVEFNSKGQRTNYTLHILEKHRGGHKEIGIWYSNNTLSMNSTALDINVSE
SLANKTLIVTTILEDPYVMRRDNYHDTDGNDQYEGFCVDMLKELSDILKFSFKIKLVDDG
LYGAPEVNGSWTGMVGELINRKADLAVAGFTITSEREKVIDFSKPFMSLGISILYRVHIG
RKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCVRDRRDLLENQY
TLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEV
PIESADDLADQTNIQYGTIQGGSTMTFFMNSRYQTYQRMWNYMHSKQPSVFVKSTEEGIA
RVVNSKYAFLLESTMNEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLGVLQLQ
ESNRLEILKRRWWEGGQCPKEEDHRAKGLGMENIGGIFVVLICGLIIAVFVAIMEFVWST
RRSAETDEVRPHPCHGRHHRHPPVSVCQEMMSEFRNAISCKKSSRSRRRRPLSSSAVLRH
PTRLTLGGPRPLRLVREMRLSNGKLYSGMGPLTGGGPPLGARAGAMGPPGPADMGPGPQR
LLEDPLGAAVSSMPSPPAPAPQPGSLGAPAAPPRGCTHVRICQECRRIQSLRSASSCSRI
PPLPSATSSLPRLPAPPPPSSSTTDSEGGGSASPRRHKTKPAPPPRPLPPCKAPSTDLLN
KQD
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgccggctctgccagcgctgctgctgtcgatacacttcctgttcctgctgctgactatg
gccccgcactctttcagccaggcccctgccatgtccgctgtcaaaatggcggccatttta
gatgaccagtcggtgtgtgggcgcggggagcggctggccctggcgctggcccgcgagaac
atcaacagcatgatggagggcccggctcgcgctcgcgtagaggtggacatcttcgagctg
cagagtgattcgcagtacgagaccactgataccatgtgccagattctgccaaagggagtg
gtttctgtcatcggccctgcctccagccctgcctctggttctactgtcagtcacatatgt
ggggagaaggagatccctcatgtaaagatcggtcctgaggagacgccgcggctgccctac
ctgcgcttcgcctccgtcagcctgtatcccagcaacgaggacctgagcctggccatcggc
tccatcctgcgctccttcagctaccccacggccagcctcatctgcgccaaggccgagtgc
ctgctgcgattggaggagctagtccgtcgtttcctcatctcccgggagacgctgtcggtg
cgcatgctggatgacagcctggaccccacccctctgctgaaggagattcgcgatgacaaa
gtggccaccatcatcatcgacgccaacgcgtccatctcctacctcatcctgagaaaggcg
tccgagttggggatgacatcagcattttacaagtacatcctcaccaccatggacttcccc
ctgttgaggctggatgatgtggtggatgaccagtccaacatcgtgggcttctccatgctc
aacagcagccaccccttctacctggagttcatccgcagcctcaacctatcctggagggag
ggctgtgatctcagtccttaccctggtccagcgctgtcgtcggctctgatgttcgacgca
gtgcacgtggtggtgggggccgtacgggagctcaaccgcagccaggagatcggcgtcaag
cccctcagctgcacctcgcccctcatctggcagcacggcaccagcctcatgaactacctg
cgcatggtggagtatgacggtctgactggacgggtggagtttaacagcaaaggccaaagg
accaactacaccctccacatcctggagaagcatagaggaggccacaaagagatcgggatc
tggtactccaacaacaccttatccatgaactccaccgcgctggacatcaacgtgtccgaa
agcctggccaacaagacgctgatagtcacaaccatcttggaggacccatacgtaatgcgc
agggataactaccacgacaccgacgggaatgaccagtacgagggcttctgtgtggacatg
ctgaaggaactgtccgacatcctcaagttctccttcaagatcaagctggtggatgatggc
ctgtatggagcgccggaggtcaacggctcctggacaggcatggtgggagagctgatcaac
aggaaagcagacctggcagtggctggtttcaccatcacctcagagagagagaaggtcatc
gatttctccaagcctttcatgtctctgggcatcagcatcctgtaccgtgtccacattggc
cggaagccgggctacttctccttcctggaccccttctctccggccgtgtggctcttcatg
ctgctggcttacctggccgtcagctgtgtgctcttcttggctgccagactgagtccgtat
gagtggtataacccgcacccgtgtgtgagggaccgcagggaccttctggagaaccagtac
accctgggcaacagcctctggttccccgtgggcggcttcatgcagcagggctctgagatc
atgccccgagccctctccacacgctgtgtcagcggggtctggtgggcgtttacgcttatc
atcatctcctcgtacacggccaacctggcggcgtttctgacggtgcagaggatggaggtg
cccatcgagtcggccgatgacctggccgaccaaaccaacatccagtatggcaccatccag
gggggaagcaccatgactttctttatgaactcacgctaccagacgtaccagcgcatgtgg
aactacatgcactccaagcagcccagcgtgtttgtgaagagcacggaggagggcatcgcc
cgcgtggtgaactccaagtacgccttcctgctggagagcaccatgaacgagtaccaccgc
cgcctcaactgcaacctcacccagatcggaggcctgttggacaccaagggctacggcatc
ggcatgcccctcggctctccattcagagatgagatcactctgggcgtgctgcaactgcag
gagagtaaccggctggagatcctcaagcgccgctggtgggaggggggacagtgccctaaa
gaagaggaccaccgggccaaaggcctgggcatggagaacatcggtgggatctttgtggtg
ctgatctgtgggctcatcatcgccgtgttcgtggctatcatggagtttgtgtggtccaca
cgccgctccgccgagactgatgaggtacgccctcacccctgccacggccgacatcacaga
caccccccagtgtccgtgtgtcaggagatgatgtcagagttccggaacgccatctcctgt
aaaaagagctcccgttcccgccggcgacgacccctctccagttcggcagtgctccggcac
cccacccgcctcacgctggggggccctcgccccttgaggcttgtgcgcgagatgcgcctt
agcaacggcaagctgtacagcgggatgggcccgttgacgggagggggcccccctctcggg
gccagagctggtgccatggggccgccgggtccagcggacatgggcccgggaccacagcgc
ctcctggaggatccactgggcgctgcagtgtccagcatgccctctccccccgcgccggcc
cctcagccgggctccctgggcgccccggcggccccgcctcgcggctgcacccacgtgcgc
atctgccaggagtgccggcggatccagagcctccgctctgcctcctcctgctcccggatc
ccgcccctcccctcggccaccagctccctgccacggctgccagccccgcccccgccctcc
tcgtccacaaccgacagcgaggggggcggctcggccagcccccgccgtcacaagaccaag
cctgcccctccaccccggcccctccctccatgcaaagccccctccacagacttactgaac
aagcaggactga
DBGET
integrated database retrieval system
