KEGG   Clupea harengus (Atlantic herring): 105892047
Entry
105892047         CDS       T09045                                 
Symbol
sf3b4
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105892047 (sf3b4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:char03041]
    105892047 (sf3b4)
Spliceosome [BR:char03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    105892047 (sf3b4)
 Complex B
    105892047 (sf3b4)
 Complex C
   U2 SnRNP specific factors
    105892047 (sf3b4)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 105892047
NCBI-ProteinID: XP_012673719
Ensembl: ENSCHAG00000007167
UniProt: A0A6P3VJR1
LinkDB
Position
19:13132541..13135898
AA seq 402 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSVPTPVMTTLGTGMSMQGMPPP
GAVPPVPPPFSMPPGMPPGMGMSHGGGGQGGGPGHQGHQGHQGHQGHQGHQGHVPFPHAM
PQMPMPPPAPPGMVPPPPGPPGSNQHRAPPPGMPPPHMGMPPRGPFGMGPPMPPGMRGPP
PMPPPGYAGGPPRPPPFGFQRGPPMPPRPPAPPRGPMRPMPP
NT seq 1209 nt   +upstreamnt  +downstreamnt
atggcggcggggccaatttcggagcgtaatcaagatgccactgtgtatgtgggtggcctg
gacgagaaggtctccgaacctctcctgtgggagcttttcctgcaagcaggacccgtcgtg
aacacacacatgcccaaagacagggtcacaggacagcaccaaggttatggctttgtggag
ttccttagcgaagaggatgcagattacgccataaagatcatgaacatgataaagctttat
ggaaagcctatacgtgtcaataaggcctcggcccacaacaagaacctggacgtgggtgca
aacatcttcatcggtaatttggatccagagatcgacgagaagctgctgtacgacaccttc
agcgcctttggggtcatcctccagacccccaagatcatgcgcgaccccgacacgggcaac
tccaagggctacgccttcatcaactttgccagctttgacgcctcggacgcagccatcgag
gccatgaacggccagtatctctgcaacaggcccatcacagtctcctacgccttcaagaag
gactccaagggcgagaggcacggctcggccgccgagaggctgctggctgcgcagaacccg
ctctcgcaggccgaccggccgcatcagctgtttgccgatgccccgccgccaccctcagtt
cccaccccggttatgacgactctcggaacaggcatgtccatgcaaggtatgcctccgcca
ggtgccgtcccacctgttcctccacccttctccatgccccccgggatgccacctggcatg
ggcatgtctcacggaggcggcggacagggaggaggtccaggacatcaaggacatcaagga
catcaaggacatcaaggccatcaaggccatcaaggccatgtacccttcccccatgccatg
ccccagatgcccatgcctccccctgctcctccgggcatggtgcctccaccaccgggtcct
ccaggctccaaccagcacagggctcctccgccaggaatgcccccaccccacatgggcatg
cctcccagagggccgttcggcatgggaccaccaatgcctccaggcatgagaggtcctcct
ccgatgccacctccaggctatgcgggtggccctccccggcctcctccattcggcttccag
aggggtcccccgatgcccccacggccccctgcgccaccccgggggcccatgaggccaatg
cccccttaa

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