Clupea harengus (Atlantic herring): 105892056
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Entry
105892056 CDS
T09045
Symbol
abcf1
Name
(RefSeq) ATP-binding cassette sub-family F member 1 isoform X1
KO
K06184
ATP-binding cassette, subfamily F, member 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
char03012
]
105892056 (abcf1)
Translation factors [BR:
char03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
105892056 (abcf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_15
ABC_tran_Xtn
AAA_22
AAA_28
AAA_14
AAA_16
NACHT
AAA
AAA_24
RsgA_GTPase
AAA_5
MMR_HSR1
AAA_25
cobW
AAA_23
ATP-synt_ab
AAA_18
Motif
Other DBs
NCBI-GeneID:
105892056
NCBI-ProteinID:
XP_012673729
Ensembl:
ENSCHAG00000019232
UniProt:
A0A6P3VKC4
LinkDB
All DBs
Position
19:14924401..14935102
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AA seq
893 aa
AA seq
DB search
MPKKAKEVEQWEGDEAATTEKPEKPVKKGKKDKKGKKSFFEELASDAKPEKEEEPVKATH
TKQPQKKKKDRRKGKGGDEDESDEDVMEKLKKLSVQASDDDDEEEVVVPSKGGKKNKGGN
IFAALSQGQSDDEEDADDDDEDEKTSKASMEVPKGKKKDKPKPKPKKTKDVSEDEQDEES
EKKDEEKKGMKKNKKAAANPSKSPEADEEVEEEQSQKKGKKEQPKSPEADEKVEEEQSRK
KGKKEQPKKSKPPTPPRNEEEEEEEQDEDKSDGDDTMMCAEDALKEQLTKEKDDDPYANL
SKKEKKKKKKMMEYERQVASIRAQNASEGDFSVSVAELSSRQAMLENASDIKLERFSISA
HGKELFVNADLLVVAGRRYGLVGPNGKGKTTLLKHIANRALSIPPNIDVLLCEQEVHADD
TPAVQAVLKADTRRLKLLEEERQLQVLLEKGDDSVAERLEKVYDELRAIGAAAAEAKARR
ILAGLGFTAEMQNRATKKFSGGWRMRVSLARALFMEPTLLMLDEPTNHLDLNAVIWLNNY
LQGWKKTLLIVSHDQSFLDEVCTDIVHLDNQKLYYYRGNYLTFKKMYVQKQKELLKQYEK
QEKKLKDLKAGGKSTKQAEKQTKEALTRKQQKGKKKGIEEESHEAQDLLRRPKEYTVKFT
FPNPPPLSPPILGLHGVDFTYESHKPLFKNVEFGIDMESRICIVGPNGVGKSTLLLLLTG
KLTPTKGEMRKNHRLKVGFFNQQYADQLNMEELAHEYLQRNFNLPYQDSRKCLGRFGLES
HAHTIQISKLSGGQKARVVFAELACRQPDVLILDEPTNNLDIESIDALSDAINEYKGAVI
IVSHDARLITETQCTLWVVEDRSVNQIDGDFDEYKREVLESLGETLVHKDLNP
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaaagccaaggaagtggaacagtgggaaggagatgaagctgcaacgacagag
aaaccagagaaaccagtcaagaaaggaaagaaggacaagaaagggaagaagagctttttt
gaggagctggcatcagatgctaaacctgagaaagaggaggaacctgtcaaagcaactcac
acgaaacaacctcagaagaaaaagaaggacagacgaaaaggtaaaggaggagatgaagat
gagtctgatgaagatgttatggagaagctgaagaagctgtcagttcaagccagtgatgat
gatgatgaagaggaagttgttgttcccagcaaaggtggaaagaaaaataaggggggcaac
atttttgctgctctaagtcaagggcagagtgatgatgaagaggatgcagatgatgatgac
gaagatgaaaaaacatctaaagcatctatggaagtgccaaagggcaagaaaaaagataag
cctaagcctaagcccaagaaaaccaaggatgtgtcagaggatgaacaggatgaggaaagt
gagaagaaagatgaggagaagaagggcatgaaaaagaacaagaaggcagcagccaatcca
tctaagtctccagaagctgacgaggaggtcgaagaggaacagtctcaaaagaaaggcaag
aaagagcagcccaagtctccagaggctgacgagaaggtcgaagaggaacagtcccgaaag
aaaggcaagaaagagcagcccaagaaaagtaagccgccgactccgccccggaatgaggag
gaggaagaggaggagcaggatgaagacaagagtgatggggatgacacgatgatgtgtgca
gaagatgccctgaaagaacaactgactaaagaaaaggacgacgacccctatgctaacctg
agcaaaaaggagaagaagaagaaaaagaaaatgatggagtatgagaggcaggtggccagt
atacgcgctcagaacgcttctgagggagacttctcagtctctgtggcagagctgtcctcc
aggcaagccatgctagagaacgcctctgacattaagctggagaggttcagcatatcagct
catggaaaggagctttttgttaacgctgaccttctggtcgttgccggaaggcgatatggt
ttagttggaccaaatggaaaaggaaagaccacacttctgaagcacattgccaatcgagcc
ctcagcatccctcctaatattgatgtacttctctgtgaacaagaggtgcatgctgatgac
actccggctgttcaggcggtgctgaaggcagacacacgccgactcaagcttctggaggaa
gagagacagctacaggttctgttggagaaaggagacgatagcgtcgccgaaagactggag
aaggtttatgatgagctgagagcaatcggagctgccgcagctgaggccaaagctcgcagg
atcttggctggtctgggcttcaccgccgagatgcagaacagagccaccaagaagttttct
ggaggctggaggatgagagtgtccctggccagagctctcttcatggagccgacgctgctg
atgctggacgagccgaccaaccacctggatctgaatgctgtcatctggcttaataattat
ctccaaggctggaagaagacccttcttattgtttcccacgaccaaagtttcctggatgaa
gtctgtacggatatcgttcacttagacaaccagaagctctattactacagaggaaactac
ttgaccttcaagaagatgtacgtccagaagcagaaggagctcctgaaacagtacgagaaa
caggagaagaaactcaaagacctaaaagctggagggaagtccactaaacaggctgagaag
cagactaaagaggccctgacacggaagcagcagaaggggaagaagaagggcattgaggag
gagagccatgaggcccaggatctgctgaggagacccaaggagtacacggtcaagttcacc
ttccccaacccgccacctctctcgccacccatccttgggctgcacggtgttgacttcacc
tatgagagccacaagcctctgtttaagaatgtggaatttggtatcgatatggagtccagg
atttgcatagtcggacccaatggagttggaaagagtacattgctccttctcttgactgga
aaattaactccaacaaaaggagagatgagaaagaaccaccggttgaaagtgggcttcttt
aaccagcagtatgctgatcagctgaacatggaagagttagcccatgagtacctccagagg
aacttcaatttgccttaccaggacagcaggaaatgcctgggccgctttggtctggagagc
catgctcacaccatccagatctccaaactgtctggaggtcaaaaagcaagagtggtgttt
gcagagctggcatgcagacaacctgatgtcctgattctggatgagcccacaaataacttg
gatattgaatcaattgatgccttatctgatgccatcaatgaatacaaaggagctgtgatc
atcgtgagccacgacgcccgtctgatcacggagacccagtgcacactgtgggtggtggag
gaccggtcagtcaatcagatcgatggtgactttgacgaatacaaacgcgaggtgctggag
tctcttggggagacactagtacacaaagacttaaacccataa
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