Clupea harengus (Atlantic herring): 105892062
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Entry
105892062 CDS
T09045
Symbol
erf
Name
(RefSeq) ETS domain-containing transcription factor ERF isoform X1
KO
K09434
ETS domain-containing transcription factor ERF
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105892062 (erf)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
105892062 (erf)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ets
HSF_DNA-bind
Med3
TFIIA
SR-25
Motif
Other DBs
NCBI-GeneID:
105892062
NCBI-ProteinID:
XP_012673738
Ensembl:
ENSCHAG00000026189
UniProt:
A0A6P3VKC9
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Position
19:12844946..12870117
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AA seq
654 aa
AA seq
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MKTPGDTGFAFPDWAYKPESSPGSRQIQLWHFILELLRKEEYQDVIAWQGDYGEFVIKDP
DEVARLWGARKCKPQMNYDKLSRALRYYYNKRILHKTKGKRFTYKFNFNKLVLVNYPFID
MGSGSGVPQSAPAVPTGMGSHFRFPPSTPSEVLSPNEELRSPGMFSAVGRRMARGSVSDC
SDGTSVTSELEEGVGGGGAGEERGGGGEQRAFRTLIHPRLSHDSLFRVYGPPPTRPGQSH
GPQPPHRSHAENLSPFPVSPLPGPGGLLGSTMSPGLSMTPGSHLAYTPSPSLSPMLGSHF
SFNPEDMKRYLQAHTQSVYNYHLSPRAFLHYPNIVIPQPHRPSEAKPPLAPPTHSHSHAH
AHAQAQAHAQAQAQAHAQLSLHHAHAHAHAPPPTEEPRLSPFQFKLQPPPMGRKQRDGPA
SGSSSSSSSSSSATALGCHSSSGSHSHLGTPKIKVEPISDVESEEEVEVTDISEEDEGDV
FAPPPHINGLGLALLHHLHPPQATNNGIVADEELDEDVFKTPAAPPTASTPSAIMAPGLL
GLKNEPRELGLGPASPGGTLCIPLKLRFKRRWSEDQRLEACGDEADDKKVRAATEEDDDE
PGCEGEAGRLRRAENAERRSPPSPLILPPAPAQRRVSSELQRATAQLSLENNGC
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccccgggggatacggggtttgctttcccagactgggcctacaaaccggagtcg
agcccaggctcgcgacagatccagctgtggcacttcatcctggagctgctgcgcaaggag
gagtaccaggatgtgatcgcctggcagggcgactacggcgagttcgtcatcaaggacccc
gacgaggtggcgcgcctgtggggcgcccggaagtgcaagccacagatgaactacgacaag
ctcagccgtgcgctcagatactactacaataagaggatccttcacaagaccaaagggaaa
cggttcacctacaagttcaactttaacaagctggtcctggtcaactacccattcatagac
atgggctctggcagtggagttccccagagtgcccctgcagtgccgaccggcatgggttcc
cacttccgcttcccgccctccacgccctccgaggtgctctcccctaacgaggagctgcgc
agcccgggcatgttcagcgcggtgggccgccgcatggcccgcggctcagtgagcgactgc
agcgacggcacctccgtcacctccgagctggaggagggcgtggggggaggcggcgctggc
gaggagcgcggaggaggaggagagcagcgggccttccgcacgctcatccacccccgcctc
tcccacgactcgctgttccgcgtctacggcccgccgcccacccgccccggccagtcgcac
gggccccagcctcctcaccgctcccacgccgagaacctctccccgttcccggtgtccccc
cttccaggccccgggggcctcctggggtccaccatgtccccgggcctgtccatgaccccc
ggctcccacctggcctacacgccgtcgccctcgctctcacccatgctgggctcccacttc
tccttcaaccccgaggacatgaagcgctacttgcaggcccacacgcagagcgtctacaac
taccacctgagcccgcgcgccttcctgcactaccccaacatcgtcatcccgcagccgcat
cgccccagcgaggccaagcccccactggccccgccgacgcactcgcactcgcacgctcat
gcccacgcccaagcccaagcccatgcccaagcgcaagcccaagcccacgcccaactgtcc
ctgcaccacgcccacgcccacgcacacgcccccccgcccaccgaggagcctcgcctctcg
cccttccagttcaagctgcagccgccaccgatgggccgcaagcagagagacgggccggcc
tctggaagttcttcctcttcctcatcttcctcctctgccacagcattgggctgccactcc
tcctcagggtcccacagccatttaggcacgcctaaaatcaaggtggagcccatctctgac
gtggagtcagaggaagaggtggaggtcactgacatcagtgaggaggacgaaggcgatgtc
tttgccccgccgccccacatcaacggcctgggcctcgccctgctccatcatctccacccc
ccacaggccaccaacaatggcatcgtggccgacgaggagctggacgaggacgttttcaag
accccggccgcaccgcccacagccagcaccccttctgccatcatggccccaggcctgctc
ggcctgaagaacgagccccgggagttgggcctgggtccggccagccccggcggcaccctc
tgcatccccctcaagctgcgcttcaagcgccgctggagcgaggaccagcgcctggaggcc
tgcggcgacgaggccgacgacaagaaggtacgcgccgccactgaggaggacgacgacgag
cccggctgcgagggtgaagcaggccgcctccggcgggctgagaacgccgaacgcaggagc
cccccctccccattgatcctgcccccagctcctgcccaaaggagggtgagctcggagctg
cagagggccacagcccagctgtccctggagaacaatggctgctga
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