Clupea harengus (Atlantic herring): 105892135
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Entry
105892135 CDS
T09045
Symbol
det1
Name
(RefSeq) DET1 homolog
KO
K10571
de-etiolated-1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105892135 (det1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105892135 (det1)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105892135 (det1)
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Gene cluster
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Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
105892135
NCBI-ProteinID:
XP_012673821
Ensembl:
ENSCHAG00000016149
UniProt:
A0A6P3VKU3
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Position
3:11625941..11632480
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AA seq
556 aa
AA seq
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MWQHTAEEDSPTLRPRRIQNQNVVHRLEQRRISSGPPGAHWYRVRCFHQNLFPNFTVVNV
EKPPCFLRKFSPDGRWFIAFSSDQTSLEIYEYQGCQAAQDLLQGQEGETLANGNDQASLG
IRGRLFERFFCLMHVTNVASNGEHLNRECSLFTDDCRYVIVGSAAYLPEEPHPHFFEVYR
NNESVTPNPRVPLEDYSLHVIDLHTGRLCDTRTFKCDKIILSHNQGLYLYRNILAVLSVQ
QQTIHVFQVTGEGTFLDVRTIGRFCYEDDLLTLSAVYSEGPSEGQPGFSRLYKEKSISSL
KHRLLVYLWRRAEQDGSALAKRRFFQYFDQLRQLRMWKMQLLDEQHLFIKYTSEDVVTMR
VSDPTQPSFFVVYNMVSTEVLAVFENTSDQLLELFENFCDLFRNATLHSEAVQFPCSASS
NNYARQVQRRFKDTIVNAKYGGHMEAVRRLLGQLPISAQSYSSSPYLDLSLFSYDDKWVS
VMERPKTCGDHPIRFYARDSGLLKFKIQAGLLGRPVSHAVRRLVAFTFHPFEPFAISVQR
TNAEYVVNFHMRHVCT
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtggcagcacacggcggaggaagactcccccaccctgcggccccgccgcatccagaac
cagaatgtggtccaccggctggagcagcgccggatcagctcggggccgccgggggcccac
tggtaccgtgtgcgctgcttccaccagaacctcttccccaacttcacagttgtcaatgtt
gaaaagccaccctgcttcctgcggaagttctcgcctgatggtcgctggttcatcgccttc
tcttctgatcagacgtcactggagatatacgagtaccaggggtgccaggcggcccaggat
ctgctccaggggcaggagggcgagacgctggccaacggcaacgaccaggcctctctgggc
atccgcgggcgactcttcgagcgcttcttctgcctcatgcacgtcaccaacgtggcgtcc
aacggcgagcacctgaaccgtgagtgcagcttgttcaccgatgactgccgttacgtcatc
gtgggctcggcggcgtacctccctgaggagccgcatccgcacttcttcgaggtgtaccgc
aacaacgagtcggtcacgcccaacccgcgtgtgcccctggaggactactcgctccacgtc
atcgacctgcacacggggcgcctctgcgacacgcgcaccttcaagtgcgacaagatcatc
ctttcccacaaccagggactgtacttgtaccgcaacatactggcagtcctctctgtccag
cagcagactattcacgtcttccaggtcaccggtgagggcaccttcctggacgtgcgcacc
atcggccgcttttgctacgaggacgacctcctgacactgtcggccgtctactcggagggt
ccgtcggagggccagccgggcttctcgcgcctctacaaggagaagagcatcagctcgctg
aagcaccggcttctggtgtacctgtggcgtcgggccgagcaggacggcagcgccctggct
aagcggcgcttcttccagtacttcgaccagctgcggcagctgcgcatgtggaagatgcag
ctgctggacgagcagcacctcttcatcaagtacaccagcgaggatgtggtcaccatgcgg
gtcagcgaccccactcagccctctttctttgtagtctacaacatggtctccacggaggtg
ctggcagtatttgagaacacgtcagaccagctgctggagctctttgagaacttctgcgac
ctgttccgcaacgccacgctgcacagtgaggccgtccagttcccctgctcggcctccagc
aacaactacgcccgccaggtgcagcgcaggtttaaggacaccatagtgaacgctaagtat
ggcggtcacatggaggctgttcggcgtttgctgggccagctgcccatcagtgcccagtcc
tacagcagcagcccctacctggacctctccctcttcagctacgatgacaaatgggtatcc
gtcatggagcgccccaaaacctgtggagaccaccccatcaggttctatgcgcgcgattct
gggcttctgaagtttaagatccaggcgggcctgctgggcagaccagttagccatgctgtc
cgcagactagtggccttcacctttcaccccttcgagccctttgccatttcagtgcagcga
accaatgccgagtatgtggtcaactttcacatgcgccatgtgtgtacatga
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