KEGG   Clupea harengus (Atlantic herring): 105892135
Entry
105892135         CDS       T09045                                 
Symbol
det1
Name
(RefSeq) DET1 homolog
  KO
K10571  de-etiolated-1
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    105892135 (det1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:char04121]
    105892135 (det1)
Ubiquitin system [BR:char04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     105892135 (det1)
SSDB
Motif
Pfam: Det1
Other DBs
NCBI-GeneID: 105892135
NCBI-ProteinID: XP_012673821
Ensembl: ENSCHAG00000016149
UniProt: A0A6P3VKU3
LinkDB
Position
3:11625941..11632480
AA seq 556 aa
MWQHTAEEDSPTLRPRRIQNQNVVHRLEQRRISSGPPGAHWYRVRCFHQNLFPNFTVVNV
EKPPCFLRKFSPDGRWFIAFSSDQTSLEIYEYQGCQAAQDLLQGQEGETLANGNDQASLG
IRGRLFERFFCLMHVTNVASNGEHLNRECSLFTDDCRYVIVGSAAYLPEEPHPHFFEVYR
NNESVTPNPRVPLEDYSLHVIDLHTGRLCDTRTFKCDKIILSHNQGLYLYRNILAVLSVQ
QQTIHVFQVTGEGTFLDVRTIGRFCYEDDLLTLSAVYSEGPSEGQPGFSRLYKEKSISSL
KHRLLVYLWRRAEQDGSALAKRRFFQYFDQLRQLRMWKMQLLDEQHLFIKYTSEDVVTMR
VSDPTQPSFFVVYNMVSTEVLAVFENTSDQLLELFENFCDLFRNATLHSEAVQFPCSASS
NNYARQVQRRFKDTIVNAKYGGHMEAVRRLLGQLPISAQSYSSSPYLDLSLFSYDDKWVS
VMERPKTCGDHPIRFYARDSGLLKFKIQAGLLGRPVSHAVRRLVAFTFHPFEPFAISVQR
TNAEYVVNFHMRHVCT
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgtggcagcacacggcggaggaagactcccccaccctgcggccccgccgcatccagaac
cagaatgtggtccaccggctggagcagcgccggatcagctcggggccgccgggggcccac
tggtaccgtgtgcgctgcttccaccagaacctcttccccaacttcacagttgtcaatgtt
gaaaagccaccctgcttcctgcggaagttctcgcctgatggtcgctggttcatcgccttc
tcttctgatcagacgtcactggagatatacgagtaccaggggtgccaggcggcccaggat
ctgctccaggggcaggagggcgagacgctggccaacggcaacgaccaggcctctctgggc
atccgcgggcgactcttcgagcgcttcttctgcctcatgcacgtcaccaacgtggcgtcc
aacggcgagcacctgaaccgtgagtgcagcttgttcaccgatgactgccgttacgtcatc
gtgggctcggcggcgtacctccctgaggagccgcatccgcacttcttcgaggtgtaccgc
aacaacgagtcggtcacgcccaacccgcgtgtgcccctggaggactactcgctccacgtc
atcgacctgcacacggggcgcctctgcgacacgcgcaccttcaagtgcgacaagatcatc
ctttcccacaaccagggactgtacttgtaccgcaacatactggcagtcctctctgtccag
cagcagactattcacgtcttccaggtcaccggtgagggcaccttcctggacgtgcgcacc
atcggccgcttttgctacgaggacgacctcctgacactgtcggccgtctactcggagggt
ccgtcggagggccagccgggcttctcgcgcctctacaaggagaagagcatcagctcgctg
aagcaccggcttctggtgtacctgtggcgtcgggccgagcaggacggcagcgccctggct
aagcggcgcttcttccagtacttcgaccagctgcggcagctgcgcatgtggaagatgcag
ctgctggacgagcagcacctcttcatcaagtacaccagcgaggatgtggtcaccatgcgg
gtcagcgaccccactcagccctctttctttgtagtctacaacatggtctccacggaggtg
ctggcagtatttgagaacacgtcagaccagctgctggagctctttgagaacttctgcgac
ctgttccgcaacgccacgctgcacagtgaggccgtccagttcccctgctcggcctccagc
aacaactacgcccgccaggtgcagcgcaggtttaaggacaccatagtgaacgctaagtat
ggcggtcacatggaggctgttcggcgtttgctgggccagctgcccatcagtgcccagtcc
tacagcagcagcccctacctggacctctccctcttcagctacgatgacaaatgggtatcc
gtcatggagcgccccaaaacctgtggagaccaccccatcaggttctatgcgcgcgattct
gggcttctgaagtttaagatccaggcgggcctgctgggcagaccagttagccatgctgtc
cgcagactagtggccttcacctttcaccccttcgagccctttgccatttcagtgcagcga
accaatgccgagtatgtggtcaactttcacatgcgccatgtgtgtacatga

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