KEGG   Clupea harengus (Atlantic herring): 105892154
Entry
105892154         CDS       T09045                                 
Name
(RefSeq) elongation factor 1-alpha
  KO
K03231  elongation factor 1-alpha
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105892154
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:char03019]
    105892154
   03016 Transfer RNA biogenesis [BR:char03016]
    105892154
   03012 Translation factors [BR:char03012]
    105892154
   04131 Membrane trafficking [BR:char04131]
    105892154
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:char04147]
    105892154
Messenger RNA biogenesis [BR:char03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     105892154
Transfer RNA biogenesis [BR:char03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    105892154
Translation factors [BR:char03012]
 Eukaryotic type
  Elongation factors
   105892154
Membrane trafficking [BR:char04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    105892154
Exosome [BR:char04147]
 Exosomal proteins
  Proteins found in most exosomes
   105892154
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 Gtr1_RagA Semialdhyde_dhC
Other DBs
NCBI-GeneID: 105892154
NCBI-ProteinID: XP_012673841
Ensembl: ENSCHAG00000015444
UniProt: A0A6P3VJI0
LinkDB
Position
19:23525238..23528860
AA seq 462 aa
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPNYSQKRYEEITKEVSAYIKK
IGYNPATVAFVPISGWHGDNMLEASAKMPWFKGWKVERKEGNASGTTLLEALDSILPPAR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPSAITTEVKSVEMHHESMP
EAMPGDNVGFNIKNVSVKDIRRGNVAGDSKNDPPMEAGCFNAQVIILNHPGQISAGYAPV
LDCHTAHIACKFNELKEKIDRRSGKKIEDNPKNLKSGDAAIVELIPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKSVEKKAAGAGKVTKSAQKAAKTK
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgggcaaggaaaaattccacattaacatcgtggttatcggccacgtcgactctggcaag
tccaccaccaccggccatctcatctacaaatgcggaggcatcgacaagagaaccattgag
aagttcgagaaggaagccgctgagatgggaaagggctccttcaagtacgcctgggtgctg
gacaaactgaaggcagagcgtgagcgtggtatcaccattgacattgctctctggaagttt
gagaccggcaagtactatgtcaccattattgatgcccctggacacagagatttcatcaag
aacatgatcactggcacatcccaggctgactgtgctgtgctgattgttgctgccggagtg
ggtgagtttgaggccggtatctccaagaatggacagacccgtgagcacgccctccttgct
ttcaccctgggagtgaaacagctcattgttggagtcaacaagatggactccaccgagccc
aactacagccaaaagcgttacgaggaaatcaccaaggaagtcagcgcctacatcaagaag
atcggctacaaccctgccactgttgcctttgtgcccatctctggttggcatggagacaac
atgctggaggccagcgccaagatgccctggttcaaggggtggaaggttgagcgcaaggag
ggtaatgccagcggtaccactctgctggaggcccttgactcaatcctgccccctgcccgc
cccaccgacaagcccctccgtctccctcttcaggatgtgtacaaaattggaggtattgga
acagtacccgtgggtcgtgtggagaccggtgtcctgaagcctggtatggttgtgaccttc
gccccctccgccatcaccactgaagtcaagtctgtggagatgcaccatgagtctatgcca
gaggctatgcccggtgacaatgttggcttcaacattaagaacgtgtcagtcaaggatatc
cgtcgtggcaacgtcgctggagacagcaagaacgacccacctatggaggccggatgcttc
aatgctcaggtcatcatcctgaaccaccctggccagatcagtgctggctatgcacctgtg
ctggattgccacaccgctcacattgcctgcaagttcaatgagctgaaggagaagatcgac
cgtcgttctggcaagaagattgaggacaaccccaagaatctgaagtctggtgacgctgcc
attgttgaactgatccctggcaagcccatgtgtgtggagagcttctccgaataccctccc
ctcggtcgtttcgctgtccgtgacatgaggcagaccgtggctgttggagtcatcaagagc
gttgagaagaaggccgccggtgcaggcaaggtcaccaagtccgcacagaaggctgccaag
accaagtga

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