Clupea harengus (Atlantic herring): 105892154
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Entry
105892154 CDS
T09045
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105892154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105892154
03016 Transfer RNA biogenesis [BR:
char03016
]
105892154
03012 Translation factors [BR:
char03012
]
105892154
04131 Membrane trafficking [BR:
char04131
]
105892154
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105892154
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
105892154
Transfer RNA biogenesis [BR:
char03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
105892154
Translation factors [BR:
char03012
]
Eukaryotic type
Elongation factors
105892154
Membrane trafficking [BR:
char04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
105892154
Exosome [BR:
char04147
]
Exosomal proteins
Proteins found in most exosomes
105892154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
105892154
NCBI-ProteinID:
XP_012673841
Ensembl:
ENSCHAG00000015444
UniProt:
A0A6P3VJI0
LinkDB
All DBs
Position
19:23525238..23528860
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPNYSQKRYEEITKEVSAYIKK
IGYNPATVAFVPISGWHGDNMLEASAKMPWFKGWKVERKEGNASGTTLLEALDSILPPAR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPSAITTEVKSVEMHHESMP
EAMPGDNVGFNIKNVSVKDIRRGNVAGDSKNDPPMEAGCFNAQVIILNHPGQISAGYAPV
LDCHTAHIACKFNELKEKIDRRSGKKIEDNPKNLKSGDAAIVELIPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKSVEKKAAGAGKVTKSAQKAAKTK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggaaaaattccacattaacatcgtggttatcggccacgtcgactctggcaag
tccaccaccaccggccatctcatctacaaatgcggaggcatcgacaagagaaccattgag
aagttcgagaaggaagccgctgagatgggaaagggctccttcaagtacgcctgggtgctg
gacaaactgaaggcagagcgtgagcgtggtatcaccattgacattgctctctggaagttt
gagaccggcaagtactatgtcaccattattgatgcccctggacacagagatttcatcaag
aacatgatcactggcacatcccaggctgactgtgctgtgctgattgttgctgccggagtg
ggtgagtttgaggccggtatctccaagaatggacagacccgtgagcacgccctccttgct
ttcaccctgggagtgaaacagctcattgttggagtcaacaagatggactccaccgagccc
aactacagccaaaagcgttacgaggaaatcaccaaggaagtcagcgcctacatcaagaag
atcggctacaaccctgccactgttgcctttgtgcccatctctggttggcatggagacaac
atgctggaggccagcgccaagatgccctggttcaaggggtggaaggttgagcgcaaggag
ggtaatgccagcggtaccactctgctggaggcccttgactcaatcctgccccctgcccgc
cccaccgacaagcccctccgtctccctcttcaggatgtgtacaaaattggaggtattgga
acagtacccgtgggtcgtgtggagaccggtgtcctgaagcctggtatggttgtgaccttc
gccccctccgccatcaccactgaagtcaagtctgtggagatgcaccatgagtctatgcca
gaggctatgcccggtgacaatgttggcttcaacattaagaacgtgtcagtcaaggatatc
cgtcgtggcaacgtcgctggagacagcaagaacgacccacctatggaggccggatgcttc
aatgctcaggtcatcatcctgaaccaccctggccagatcagtgctggctatgcacctgtg
ctggattgccacaccgctcacattgcctgcaagttcaatgagctgaaggagaagatcgac
cgtcgttctggcaagaagattgaggacaaccccaagaatctgaagtctggtgacgctgcc
attgttgaactgatccctggcaagcccatgtgtgtggagagcttctccgaataccctccc
ctcggtcgtttcgctgtccgtgacatgaggcagaccgtggctgttggagtcatcaagagc
gttgagaagaaggccgccggtgcaggcaaggtcaccaagtccgcacagaaggctgccaag
accaagtga
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