Clupea harengus (Atlantic herring): 105892221
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Entry
105892221 CDS
T09045
Symbol
ssh1b
Name
(RefSeq) protein phosphatase Slingshot homolog 1 isoform X1
KO
K05766
protein phosphatase slingshot [EC:
3.1.3.16
3.1.3.48
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
105892221 (ssh1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105892221 (ssh1b)
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
105892221 (ssh1b)
3.1.3.48 protein-tyrosine-phosphatase
105892221 (ssh1b)
Protein phosphatases and associated proteins [BR:
char01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
Slingshots
105892221 (ssh1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_SSH1-like_1st
DSPc
DEK_C
PTP-SAK
Y_phosphatase
Tc-R-P
Motif
Other DBs
NCBI-GeneID:
105892221
NCBI-ProteinID:
XP_031434061
Ensembl:
ENSCHAG00000020210
UniProt:
A0A6P8GBH7
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Position
12:16315564..16331722
Genome browser
AA seq
1111 aa
AA seq
DB search
MALVTLQRSPTPSAASTASTGASTAGEDLGSDDDRKANQSLSESFFMVKGAALFLQQGGN
SNTQDPRTPTHHKHAGDLPQHLQVMINTLRSEDRITLAVRLESVWSDRVRYMVVVYTNGR
QDTEENILLGMDFTNKDSKSCSIGMVLPLWSDTSIHLDGDGGFSVNTAGHSHVFKPVSVQ
AMWSALQVLHKACEVSRRYNYFPGGMALTWTGYYESCISSEQSCINEWNAMTDLETSRPD
SPTMFTDRPTERERTECLIKSKLRSVMMFQDLENVTSKEIRTELEQHMSCNLKEYKEFID
NEMLLILGQMDKATLIFDHLYLGSEWNASNLEELRDLGVGYILNVTREIDNFFPGTFAYH
NIRVYDEEATDLLAHWNDTYNFIVRAKKNQSKCLVHCKMGVSRSASTVIAYAMKEYGWSL
EKALNLVKQKRTIACPNSGFMRQLAEYEGILDASKQRHNKLWHPEGGGDEMPEGAQVCCG
PEGERGEGEEGEPAWMREGGASASPHCCGGVVEMAPLDQLNYNYYFRRLSDTALDSEPST
PVRGPPLLGLERVFIEIEDVERDALLDDDGFPTPTLGPPLGEGTAAQTCSRLEPLEDMRL
RLEFSTVEEEDEEEAQKEEAEMAALASGAAGGAGAEGGQDGGAVSRSSSGSSLANLNRFN
NENANNSNRLANKRSCPPTFDDSASIRNPYKVKPSYQSCRDCLRLPSSRRCERSAGGRTH
RLNPPRHSTLPTISIEPPRGAGIPFVPTRPSSSSSHMLQIPAASTRPPPAQPPCSHLCRC
GRCPRCANRVLPGPAPPPMASLEAYRQQLVSPMNCEELQRDLQCPLETEDLEELQEEEEE
AEKDEEEKRRGRQGAVSTGVISELTLLQLSLDGGERPVTELHQEPLSMKPVVELPQEPLS
VTPVVELHQDALPLRPEAELHQKDLLGHTLTTGLVRQRLEQLSSLPLEDTLPKGSQPELM
DLGRAGEEKAPHGPMEDMEIESGSGISGVQALETPVLSPGRALLPSSPLGCSLTRSSSSD
SLASLASVRGGEPGLVRQRAQEIETRMRLAGLTIPSPLKRSNSLAKLGDLTLSTQDLSPS
QLSDSSAGEQMPLYPALPSILAKSQSGVPQS
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggccctggtaacgctgcagcgctcccccaccccgagtgcagcatccactgccagcacc
ggcgccagcaccgcgggggaggatttggggagcgatgacgaccgaaaggccaaccagagc
ctcagtgagagcttctttatggtcaaaggggcagctctgtttctccagcagggcggcaat
agtaacacacaagatcccaggaccccaactcaccacaaacacgcaggtgatttaccccaa
cacctgcaggtaatgatcaacactcttcgctctgaggaccgcattacgctggctgtcaga
ttggagagtgtctggtctgatcgtgtgcgatacatggtcgttgtttacacaaatgggaga
caagatacggaagaaaacatccttttgggcatggatttcacaaacaaggacagcaaaagt
tgttccattgggatggttttgcctttgtggagtgacaccagtatacacttggacggtgat
ggaggcttcagtgtgaacacagctggacactcacacgtattcaagccggtgtcagtccag
gccatgtggtccgccctgcaggtcctacacaaagcctgcgaggtgtcgcgcaggtacaac
tacttcccaggcgggatggcgctcacctggacgggttactacgagagctgcatctcctcg
gagcagagctgcatcaatgaatggaacgccatgaccgacctggagacctctcggcctgac
tcacccactatgttcactgaccggccgacagagagagagcgaacagaatgtcttatcaag
tccaaactacgcagtgtcatgatgttccaggatctggagaatgtcacctcaaaggagatt
cgcaccgagctcgaacaacatatgagctgcaacctcaaggagtacaaggagttcatcgac
aacgagatgttgctcatcctcggccagatggacaaagccacgctcatatttgaccacctc
tacttgggctcggagtggaatgcctctaatcttgaagagctgcgagacttgggggtgggt
tacatccttaatgtcaccagggagattgacaacttcttcccaggcacatttgcatatcat
aatatacgagtttacgacgaggaggccactgatttgctggctcattggaatgacacctac
aacttcatcgtcagagccaagaaaaatcagtccaagtgtctggtacactgtaagatgggt
gtgagtcgatcagcctccacagtgatcgcttacgccatgaaggagtatggctggtccctt
gagaaggccttaaacttggtgaaacagaagaggaccatcgcatgccccaactctggcttc
atgaggcaactggctgagtacgagggcatcctggacgccagcaaacaaaggcacaataag
ctgtggcatcctgagggagggggcgatgagatgcctgagggggcccaggtgtgctgtggc
cctgagggggagcgtggggaaggggaggagggcgagccggcgtggatgcgggaaggaggc
gcatctgcgtctcctcactgctgcggaggtgtagtggagatggcgcccctggaccagctg
aactacaactactacttccgccgcctgtcggacacagcactggacagcgagccctcaaca
ccagtgcgtggccctccgctgctgggcctcgagcgcgtcttcatcgagatcgaggacgtg
gagcgcgacgcgctgctggacgacgacggcttccccacgccgacgctgggcccgccgctc
ggagaggggacggcggcgcagacctgcagcaggctggagcccctggaagacatgcgtctg
cggctggagttcagtacggtggaggaagaggacgaggaggaggcacagaaggaggaggcc
gagatggcggcgctcgccagcggagcggccgggggagcgggggcagagggtggccaggac
gggggcgctgtgtcccggtcgtcatccgggtcctcgctggccaacctgaaccgcttcaac
aacgagaatgccaacaacagtaatcgtctcgccaacaaacgcagctgcccgcctaccttt
gacgacagtgctagcatcagaaacccttacaaggtgaagccctcttaccagtcgtgccgg
gactgcctgcgtctgccatcgagtcggcgctgcgagcgctcggccggagggcgcacccac
cgccttaatcccccacgccactccacgcttcccaccatctccatagagcccccgcgaggg
gcaggtatccccttcgtccccacgcgcccctcctcctcctcctcccacatgctccagatt
ccagcggctagcacccgcccccctcccgcccagcccccctgcagccacctctgccgctgt
ggccgatgcccccgctgtgccaaccgtgtcctccccggaccggcccctcccccaatggca
agcctggaggcttaccgtcagcagctggtgtcccccatgaattgtgaggagctccagcgg
gatctgcagtgcccactggagacagaggacctggaggagctgcaagaggaagaagaagaa
gcagaaaaggatgaggaagagaagcgaagaggaaggcaaggggcagttagcacaggggtc
attagcgagctcacactgctccagctgagtctggatggtggagagaggcctgtcacagag
ctgcaccaggagcccttgtctatgaagccagttgtggagctaccacaggagcccctgtct
gtgacacctgttgtggagctacaccaggacgctctcccattgaggccagaagcagagctg
catcagaaagacttgttaggacacacgctgaccactggcctggtgcggcagcgtctggag
caactctccagcctgcccctagaggacaccctccccaaaggatcccagccagagctgatg
gacctaggcagggctggggaggagaaggcgccccatggccccatggaggacatggaaata
gagagcggcagtggcattagtggcgttcaagctttggagactcctgttctttcgccaggc
agggctctccttccctcttccccgctcgggtgctccctgacccgcagctccagcagtgac
agcctggccagcctggccagtgtccgggggggggagccgggtctggtacggcagcgggca
caggaaattgagacacgcatgcggctagcagggctcaccatcccctcccccctcaaacgc
tccaactccttggccaagctgggcgacctcaccctctccacccaggacctctcaccctcc
caactttccgactccagcgcaggagaacaaatgcccctgtatcccgccctcccctccatt
ctggccaaatcccagtctggggtacctcaaagctaa
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